Follow
Michael D. Lee
Michael D. Lee
NASA Ames Research Center
Verified email at nasa.gov - Homepage
Title
Cited by
Cited by
Year
GToTree: a user-friendly workflow for phylogenomics
MD Lee
Bioinformatics, 2019
1882019
Community-led, integrated, reproducible multi-omics with anvi’o
AM Eren, E Kiefl, A Shaiber, I Veseli, SE Miller, MS Schechter, I Fink, ...
Nature Microbiology, 2020
1582020
Energy and carbon metabolisms in a deep terrestrial subsurface fluid microbial community
L Momper, SP Jungbluth, MD Lee, JP Amend
The ISME journal 11 (10), 2319-2333, 2017
882017
Mechanisms of increased Trichodesmium fitness under iron and phosphorus co-limitation in the present and future ocean
NG Walworth, FX Fu, EA Webb, MA Saito, D Moran, MR Mcllvin, MD Lee, ...
Nature communications 7 (1), 1-11, 2016
732016
The Trichodesmium consortium: conserved heterotrophic co-occurrence and genomic signatures of potential interactions
MD Lee, NG Walworth, EL McParland, FX Fu, TJ Mincer, NM Levine, ...
The ISME journal 11 (8), 1813-1824, 2017
502017
Hidden genomic diversity of SARS-CoV-2: implications for qRT-PCR diagnostics and transmission
N Sapoval, M Mahmoud, M Jochum, Y Liu, RAL Elworth, Q Wang, D Albin, ...
Genome Research, gr. 268961.120, 2021
47*2021
Microbial communities on seafloor basalts at Dorado Outcrop reflect level of alteration and highlight global lithic clades
MD Lee, NG Walworth, JB Sylvan, KJ Edwards, BN Orcutt
Frontiers in microbiology 6, 1470, 2015
442015
Molecular and physiological evidence of genetic assimilation to high CO2 in the marine nitrogen fixer Trichodesmium
NG Walworth, MD Lee, FX Fu, DA Hutchins, EA Webb
Proceedings of the National Academy of Sciences 113 (47), E7367-E7374, 2016
412016
Assessing marine microbial induced corrosion at Santa Catalina Island, California
GA Ramírez, CL Hoffman, MD Lee, RA Lesniewski, RA Barco, A Garber, ...
Frontiers in microbiology 7, 1679, 2016
322016
Jellyfish life stages shape associated microbial communities, while a core microbiome is maintained across all
MD Lee, JD Kling, R Araya, J Ceh
Frontiers in microbiology 9, 1534, 2018
262018
Nutrient-colimited Trichodesmium as a nitrogen source or sink in a future ocean
NG Walworth, FX Fu, MD Lee, X Cai, MA Saito, EA Webb, DA Hutchins
Applied and environmental microbiology 84 (3), e02137-17, 2018
262018
Transient exposure to novel high temperatures reshapes coastal phytoplankton communities
DA Kling, J.D., Lee, M.D., Fu, F-X., Phan, M.D., Wang, X., Qu, P., Hutchins
The ISME Journal, 2019
25*2019
Marine Synechococcus isolates representing globally abundant genomic lineages demonstrate a unique evolutionary path of genome reduction without a decrease in GC content
MD Lee, NA Ahlgren, JD Kling, NG Walworth, G Rocap, MA Saito, ...
Environmental Microbiology, 2019
252019
Community-led, integrated, reproducible multi-omics with anvi’o. Nat Microbiol 6: 3–6
AM Eren, E Kiefl, A Shaiber, I Veseli, SE Miller, MS Schechter, I Fink, ...
242021
Genomic mosaicism underlies the adaptation of marine Synechococcus ecotypes to distinct oceanic iron niches
NA Ahlgren, BS Belisle, MD Lee
Environmental Microbiology 22 (5), 1801-1815, 2020
232020
NASA GeneLab RNA-seq consensus pipeline: standardized processing of short-read RNA-seq data
EG Overbey, AM Saravia-Butler, Z Zhang, KS Rathi, H Fogle, ...
Iscience 24 (4), 102361, 2021
192021
Transcriptional activities of the microbial consortium living with the marine nitrogen-fixing cyanobacterium Trichodesmium reveal potential roles in community-level nitrogen …
MD Lee, EA Webb, NG Walworth, FX Fu, NA Held, MA Saito, DA Hutchins
Applied and environmental microbiology 84 (1), e02026-17, 2018
172018
Happy Belly Bioinformatics: an open-source resource dedicated to helping biologists utilize bioinformatics
MD Lee
The Journal of Open-Source Education, 2019
162019
Genomic and phenotypic characterization of Burkholderia isolates from the potable water system of the International Space Station
A O’Rourke, MD Lee, WC Nierman, RC Everroad, CL Dupont
PloS one 15 (2), e0227152, 2020
122020
Lettuce (Lactuca sativa) productivity influenced by microbial inocula under nitrogen-limited conditions in aquaponics
JA Day, C Diener, AE Otwell, KE Tams, B Bebout, AM Detweiler, MD Lee, ...
Plos one 16 (2), e0247534, 2021
11*2021
The system can't perform the operation now. Try again later.
Articles 1–20