Kristopher Opron
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A topological approach for protein classification
Z Cang, L Mu, K Wu, K Opron, K Xia, GW Wei
Computational and Mathematical Biophysics 1 (open-issue), 2015
Multiscale multiphysics and multidomain models—Flexibility and rigidity
K Xia, K Opron, GW Wei
The Journal of chemical physics 139 (19), 11B614_1, 2013
Fast and anisotropic flexibility-rigidity index for protein flexibility and fluctuation analysis
K Opron, K Xia, GW Wei
The Journal of chemical physics 140 (23), 06B617_1, 2014
Molecular dynamics and mutational analysis of the catalytic and translocation cycle of RNA polymerase
ML Kireeva, K Opron, SA Seibold, C Domecq, RI Cukier, B Coulombe, ...
BMC biophysics 5 (1), 1-18, 2012
The RNA polymerase bridge helix YFI motif in catalysis, fidelity and translocation
YA Nedialkov, K Opron, F Assaf, I Artsimovitch, ML Kireeva, M Kashlev, ...
Biochimica et Biophysica Acta (BBA)-Gene Regulatory Mechanisms 1829 (2), 187-198, 2013
Communication: Capturing protein multiscale thermal fluctuations
K Opron, K Xia, GW Wei
The Journal of chemical physics 142 (21), 06B401_1, 2015
Multiscale Gaussian network model (mGNM) and multiscale anisotropic network model (mANM)
K Xia, K Opron, GW Wei
The Journal of chemical physics 143 (20), 11B616_1, 2015
Ribosome structure, function, and early evolution
K Opron, ZF Burton
International journal of molecular sciences 20 (1), 40, 2019
Five checkpoints maintaining the fidelity of transcription by RNA polymerases in structural and energetic details
B Wang, K Opron, ZF Burton, RI Cukier, M Feig
Nucleic acids research 43 (2), 1133-1146, 2015
A tRNA-and anticodon-centric view of the evolution of aminoacyl-tRNA synthetases, tRNAomes, and the genetic code
Y Kim, K Opron, ZF Burton
Life 9 (2), 37, 2019
Gut microbiota relationships to lung function and adult asthma phenotype: a pilot study
L Begley, S Madapoosi, K Opron, O Ndum, A Baptist, K Rysso, ...
BMJ open respiratory research 5 (1), 2018
Flexibility–rigidity index for protein–nucleic acid flexibility and fluctuation analysis
K Opron, K Xia, Z Burton, GW Wei
Journal of computational chemistry 37 (14), 1283-1295, 2016
A model for genesis of transcription systems
ZF Burton, K Opron, G Wei, JH Geiger
Transcription 7 (1), 1-13, 2016
Type-II tRNAs and evolution of translation systems and the genetic code
Y Kim, B Kowiatek, K Opron, ZF Burton
International journal of molecular sciences 19 (10), 3275, 2018
Measures of cystic fibrosis airway microbiota during periods of clinical stability
LJ Caverly, J Lu, LA Carmody, LM Kalikin, K Shedden, K Opron, M Azar, ...
Annals of the American Thoracic Society 16 (12), 1534-1542, 2019
Hinge action versus grip in translocation by RNA polymerase
YA Nedialkov, K Opron, HL Caudill, F Assaf, AJ Anderson, RI Cukier, ...
Transcription 9 (1), 1-16, 2018
Parallel Analysis of Cystic Fibrosis Sputum and Saliva Reveals Overlapping Communities and an Opportunity for Sample Decontamination
J Lu, LA Carmody, K Opron, RH Simon, LM Kalikin, LJ Caverly, JJ LiPuma
Msystems 5 (4), e00296-20, 2020
10 How is fidelity maintained in nucleic acids? Two tales in DNA repair and DNA transcription from computer simulations
M Feig, B Wang, M Sharma, Z Burton, K Opron, R Cukier, A Predeus, ...
Journal of Biomolecular Structure and Dynamics 33 (sup1), 6-7, 2015
Lung microbiota associations with clinical features of COPD in the SPIROMICS cohort
K Opron, LA Begley, JR Erb-Downward, C Freeman, S Madapoosi, ...
npj Biofilms and Microbiomes 7 (1), 1-10, 2021
Transcriptomic Profiles of Sepsis in the Human Brain
AC Bustamante, K Opron, WJ Ehlenbach, EB Larson, PK Crane, ...
American journal of respiratory and critical care medicine 201 (7), 861-863, 2020
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Articles 1–20