| The TOPCONS web server for consensus prediction of membrane protein topology and signal peptides KD Tsirigos, C Peters, N Shu, L Käll, A Elofsson Nucleic acids research 43 (W1), W401-W407, 2015 | 917 | 2015 |
| ProQ3D: improved model quality assessments using deep learning K Uziela, D Menéndez Hurtado, N Shu, B Wallner, A Elofsson Bioinformatics 33 (10), 1578-1580, 2017 | 180 | 2017 |
| Prediction of zinc-binding sites in proteins from sequence N Shu, T Zhou, S Hovmöller Bioinformatics 24 (6), 775-782, 2008 | 123 | 2008 |
| ProQ3: Improved model quality assessments using Rosetta energy terms K Uziela, N Shu, B Wallner, A Elofsson Scientific Reports 6 (33509), 2016 | 114 | 2016 |
| Inclusion of dyad-repeat pattern improves topology prediction of transmembrane β-barrel proteins S Hayat, C Peters, N Shu, KD Tsirigos, A Elofsson Bioinformatics 32 (10), 1571-1573, 2016 | 87 | 2016 |
| Improved topology prediction using the terminal hydrophobic helices rule C Peters, KD Tsirigos, N Shu, A Elofsson Bioinformatics 32 (8), 1158-1162, 2016 | 58 | 2016 |
| The TOPCONS web server for combined membrane protein topology and signal peptide prediction KD Tsirigos, C Peters, N Shu, L Käll, A Elofsson Nucleic Acids Res 43, W401-W407, 2015 | 38 | 2015 |
| Topology of membrane proteins—predictions, limitations and variations KD Tsirigos, S Govindarajan, C Bassot, Å Västermark, J Lamb, N Shu, ... Current opinion in structural biology 50, 9-17, 2018 | 37 | 2018 |
| SubCons: a new ensemble method for improved human subcellular localization predictions M Salvatore, P Warholm, N Shu, W Basile, A Elofsson Bioinformatics 33 (16), 2464-2470, 2017 | 34 | 2017 |
| A novel method for accurate one-dimensional protein structure prediction based on fragment matching T Zhou, N Shu, S Hovmöller Bioinformatics 26 (4), 470-477, 2010 | 30 | 2010 |
| Improved protein model quality assessments by changing the target function K Uziela, D Menendez Hurtado, N Shu, B Wallner, A Elofsson Proteins: Structure, Function, and Bioinformatics 86 (6), 654-663, 2018 | 21 | 2018 |
| The SubCons webserver: a user friendly web interface for state‐of‐the‐art subcellular localization prediction M Salvatore, N Shu, A Elofsson Protein Science 27 (1), 195-201, 2018 | 15 | 2018 |
| A novel counter sheet-flow sandwich cell culture device for mammalian cell growth in space S Sun, Y Gao, N Shu, Z Tang, Z Tao, M Long Microgravity Science and Technology 20, 115-120, 2008 | 14 | 2008 |
| Large tilts in transmembrane helices can be induced during tertiary structure formation M Virkki, C Boekel, K Illergård, C Peters, N Shu, KD Tsirigos, A Elofsson, ... Journal of Molecular Biology 426 (13), 2529-2538, 2014 | 12 | 2014 |
| KalignP: Improved multiple sequence alignments using position specific gap penalties in Kalign2 N Shu, A Elofsson Bioinformatics 27 (12), 1702-1703, 2011 | 9 | 2011 |
| The evolutionary history of topological variations in the CPA/AT transporters G Sudha, C Bassot, J Lamb, N Shu, Y Huang, A Elofsson PLoS Computational Biology 17 (8), e1009278, 2021 | 3 | 2021 |
| Describing and comparing protein structures using shape strings N Shu, S Hovmoller, T Zhou Current Protein and Peptide Science 9 (4), 310-324, 2008 | 3 | 2008 |
| The evolutionary history of topological variations in the CPA/AT superfamily S Govindarajan, C Bassot, J Lamb, N Shu, Y Huang, A Elofsson bioRxiv, 2020.12. 13.422607, 2020 | 2 | 2020 |
| PRODRES: Fast protein searches using a protein domain-reduced database S Pascarelli, K Tsirigos, N Shu, C Peters, A Elofsson | | 2017 |
| A Segment Matching Method for Remote Homology Detection N Shu, T Zhou, S Hovmölle 2010 4th International Conference on Bioinformatics and Biomedical …, 2010 | | 2010 |
Arne ElofssonScience for Life Laboratory and department of Biochemistry and Biophysics, Stockholm UniversityVerified email at bioinfo.se
