Bernie J. Daigle, Jr.
Bernie J. Daigle, Jr.
Assistant Professor of Biological Sciences and Computer Science at The University of Memphis
Verified email at memphis.edu - Homepage
Title
Cited by
Cited by
Year
Mucosal biofilm formation on middle-ear mucosa in the chinchilla model of otitis media
GD Ehrlich, R Veeh, X Wang, JW Costerton, JD Hayes, FZ Hu, BJ Daigle, ...
Jama 287 (13), 1710-1715, 2002
4382002
Independent component analysis: mining microarray data for fundamental human gene expression modules
JM Engreitz, BJ Daigle Jr, JJ Marshall, RB Altman
Journal of biomedical informatics 43 (6), 932-944, 2010
1142010
Accelerated maximum likelihood parameter estimation for stochastic biochemical systems
BJ Daigle, MK Roh, LR Petzold, J Niemi
BMC bioinformatics 13 (1), 68, 2012
592012
Automated estimation of rare event probabilities in biochemical systems
BJ Daigle Jr, MK Roh, DT Gillespie, LR Petzold
The Journal of chemical physics 134 (4), 01B628, 2011
502011
Core module biomarker identification with network exploration for breast cancer metastasis
R Yang, BJ Daigle, LR Petzold, FJ Doyle
BMC bioinformatics 13 (1), 12, 2012
412012
Stochastic simulation service: bridging the gap between the computational expert and the biologist
B Drawert, A Hellander, B Bales, D Banerjee, G Bellesia, BJ Daigle Jr, ...
PLoS computational biology 12 (12), e1005220, 2016
392016
Inferring single-cell gene expression mechanisms using stochastic simulation
BJ Daigle Jr, M Soltani, LR Petzold, A Singh
Bioinformatics 31 (9), 1428-1435, 2015
372015
State-dependent doubly weighted stochastic simulation algorithm for automatic characterization of stochastic biochemical rare events
MK Roh, BJ Daigle Jr, DT Gillespie, LR Petzold
The Journal of chemical physics 135 (23), 234108, 2011
302011
Whole-genome DNA methylation status associated with clinical PTSD measures of OIF/OEF veterans
R Hammamieh, N Chakraborty, A Gautam, S Muhie, R Yang, D Donohue, ...
Translational psychiatry 7 (7), e1169-e1169, 2017
282017
Systems biology approach to understanding post-traumatic stress disorder
GS Thakur, BJ Daigle Jr, KR Dean, Y Zhang, M Rodriguez-Fernandez, ...
Molecular BioSystems 11 (4), 980-993, 2015
272015
Multi-omic biomarker identification and validation for diagnosing warzone-related post-traumatic stress disorder
KR Dean, R Hammamieh, SH Mellon, D Abu-Amara, JD Flory, G Guffanti, ...
Molecular psychiatry, 1-13, 2019
252019
Mice lacking the β2 adrenergic receptor have a unique genetic profile before and after focal brain ischaemia
RE White, C Palm, L Xu, E Ling, M Ginsburg, JD Bernie Jr, R Han, ...
ASN neuro 4 (5), AN20110020, 2012
232012
Core modular blood and brain biomarkers in social defeat mouse model for post traumatic stress disorder
R Yang, BJ Daigle Jr, SY Muhie, R Hammamieh, M Jett, L Petzold, ...
BMC systems biology 7 (1), 80, 2013
202013
Using pre-existing microarray datasets to increase experimental power: application to insulin resistance
BJ Daigle Jr, A Deng, T McLaughlin, SW Cushman, MC Cam, G Reaven, ...
PLoS Comput Biol 6 (3), e1000718, 2010
152010
M-BISON: microarray-based integration of data sources using networks
BJ Daigle, RB Altman
BMC bioinformatics 9 (1), 1-17, 2008
142008
Quantitative biology: theory, computational methods, and models
B Munsky, KT Tuzman, D Fey, M Dobrzynski, BN Kholodenko, S Olson, ...
The MIT Press, 2018
92018
Current progress in static and dynamic modeling of biological networks
BJ Daigle, BS Srinivasan, JA Flannick, AF Novak, S Batzoglou
Systems Biology for Signaling Networks, 13-73, 2010
72010
817. Nonrandom Insertion Site Preferences for the SB Transposon In Vitro and In Vivo
SR Yant, X Wu, Y Huang, B Daigle, BA Garrison, SM Burgess, MA Kay
Molecular Therapy 9, S309-S310, 2004
62004
icHET: interactive visualization of cytoplasmic heteroplasmy
V Phan, DT Pham, C Melton, AJ Ramsey, BJ Daigle Jr, JR Mandel
Bioinformatics 35 (21), 4411-4412, 2019
52019
Data-driven mortality prediction for trauma patients
YY Zhang, BJ Daigle, L Ferrigno, M Cohen, L Petzold
Proc. Annual Conf. on Neurl. Inf. Proc. Syst, 2014
42014
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Articles 1–20