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Xianjun Dong, PhD
Xianjun Dong, PhD
Assistant Professor, Harvard Medical School; Director of Genomics and Bioinformatics Hub, BWH
Verified email at rics.bwh.harvard.edu - Homepage
Title
Cited by
Cited by
Year
An integrated encyclopedia of DNA elements in the human genome
ENCODE Project Consortium
Nature, 2012
119702012
An integrated encyclopedia of DNA elements in the human genome
ENCODE Project Consortium Overall coordination (data analysis coordination ...
Nature 489 (7414), 57-74, 2012
25882012
A user’s guide to the encyclopedia of DNA elements (ENCODE)
ENCODE Project Consortium
PLoS Biol 9 (4), e1001046, 2011
13502011
Sequence features and chromatin structure around the genomic regions bound by 119 human transcription factors
J Wang, J Zhuang, S Iyer, XY Lin, TW Whitfield, MC Greven, BG Pierce, ...
Genome research 22 (9), 1798-1812, 2012
9692012
Mbd3/NURD complex regulates expression of 5-hydroxymethylcytosine marked genes in embryonic stem cells
O Yildirim, R Li, JH Hung, PB Chen, X Dong, LS Ee, Z Weng, OJ Rando, ...
Cell 147 (7), 1498-1510, 2011
4832011
Factorbook. org: a Wiki-based database for transcription factor-binding data generated by the ENCODE consortium
J Wang, J Zhuang, S Iyer, XY Lin, MC Greven, BH Kim, J Moore, ...
Nucleic Acids Research, 2012
4002012
An ancient transcription factor initiates the burst of piRNA production during early meiosis in mouse testes
XZ Li, CK Roy, X Dong, E Bolcun-Filas, J Wang, BW Han, J Xu, MJ Moore, ...
Molecular cell 50 (1), 67-81, 2013
3302013
β2-Adrenoreceptor is a regulator of the α-synuclein gene driving risk of Parkinson’s disease
S Mittal, K Bjørnevik, DS Im, A Flierl, X Dong, JJ Locascio, KM Abo, ...
Science 357 (6354), 891-898, 2017
3152017
Modeling gene expression using chromatin features in various cellular contexts
X Dong, MC Greven, A Kundaje, S Djebali, JB Brown, C Cheng, ...
Genome biology 13 (9), 1, 2012
2952012
Specifically neuropathic Gaucher's mutations accelerate cognitive decline in Parkinson's
G Liu, B Boot, JJ Locascio, IE Jansen, S Winder‐Rhodes, S Eberly, ...
Annals of neurology 80 (5), 674-685, 2016
1982016
Understanding transcriptional regulation by integrative analysis of transcription factor binding data
C Cheng, R Alexander, R Min, J Leng, KY Yip, J Rozowsky, KK Yan, ...
Genome research 22 (9), 1658-1667, 2012
1792012
Two independent transcription initiation codes overlap on vertebrate core promoters
V Haberle, N Li, Y Hadzhiev, C Plessy, C Previti, C Nepal, J Gehrig, ...
Nature 507 (7492), 381-385, 2014
1652014
The correlation between histone modifications and gene expression
X Dong, Z Weng
Epigenomics 5 (2), 113-116, 2013
1552013
MicroRNAs located in the Hox gene clusters are implicated in huntington's disease pathogenesis
AG Hoss, VK Kartha, X Dong, JC Latourelle, A Dumitriu, TC Hadzi, ...
PLoS Genet 10 (2), e1004188, 2014
1162014
Transcriptional features of genomic regulatory blocks
A Akalin, D Fredman, E Arner, X Dong, JC Bryne, H Suzuki, CO Daub, ...
Genome biology 10 (4), 1, 2009
1082009
Differential evolution of the 13 Atlantic salmon Hox clusters
S Mungpakdee, HC Seo, AR Angotzi, X Dong, A Akalin, D Chourrout
Molecular Biology and Evolution 25 (7), 1333-1343, 2008
772008
Association between α-synuclein blood transcripts and early, neuroimaging-supported Parkinson’s disease
JJ Locascio, S Eberly, Z Liao, G Liu, AN Hoesing, K Duong, ...
Brain 138 (9), 2659-2671, 2015
662015
Epigenetic dysregulation of hairy and enhancer of split 4 (HES4) is associated with striatal degeneration in postmortem Huntington brains
G Bai, I Cheung, HP Shulha, JE Coelho, P Li, X Dong, M Jakovcevski, ...
Human molecular genetics, ddu561, 2014
622014
Enhancers active in dopamine neurons are a primary link between genetic variation and neuropsychiatric disease
X Dong, Z Liao, D Gritsch, Y Hadzhiev, Y Bai, JJ Locascio, B Guennewig, ...
Nature neuroscience 21 (10), 1482-1492, 2018
572018
Exonic remnants of whole-genome duplication reveal cis-regulatory function of coding exons
X Dong, P Navratilova, D Fredman, Ø Drivenes, TS Becker, B Lenhard
Nucleic acids research 38 (4), 1071-1085, 2010
562010
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Articles 1–20