| Pharos: collating protein information to shed light on the druggable genome DT Nguyen, S Mathias, C Bologa, S Brunak, N Fernandez, A Gaulton, ... Nucleic acids research 45 (D1), D995-D1002, 2017 | 276 | 2017 |
| TCRD and Pharos 2021: mining the human proteome for disease biology TK Sheils, SL Mathias, KJ Kelleher, VB Siramshetty, DT Nguyen, ... Nucleic Acids Research 49 (D1), D1334-D1346, 2021 | 133 | 2021 |
| CATMoS: collaborative acute toxicity modeling suite K Mansouri, AL Karmaus, J Fitzpatrick, G Patlewicz, P Pradeep, D Alberga, ... Environmental health perspectives 129 (4), 047013, 2021 | 108 | 2021 |
| Novel consensus architecture to improve performance of large-scale multitask deep learning QSAR models AV Zakharov, T Zhao, DT Nguyen, T Peryea, T Sheils, A Yasgar, R Huang, ... Journal of chemical information and modeling 59 (11), 4613-4624, 2019 | 62 | 2019 |
| Pharos 2023: an integrated resource for the understudied human proteome KJ Kelleher, TK Sheils, SL Mathias, JJ Yang, VT Metzger, VB Siramshetty, ... Nucleic acids research 51 (D1), D1405-D1416, 2023 | 54 | 2023 |
| NCATS Inxight Drugs: a comprehensive and curated portal for translational research VB Siramshetty, I Grishagin, ÐT Nguyễn, T Peryea, Y Skovpen, ... Nucleic Acids Research 50 (D1), D1307-D1316, 2022 | 39 | 2022 |
| How to illuminate the druggable genome using pharos T Sheils, SL Mathias, VB Siramshetty, G Bocci, CG Bologa, JJ Yang, ... Current protocols in bioinformatics 69 (1), e92, 2020 | 37 | 2020 |
| RaMP-DB 2.0: a renovated knowledgebase for deriving biological and chemical insight from metabolites, proteins, and genes J Braisted, A Patt, C Tindall, T Sheils, J Neyra, K Spencer, T Eicher, ... Bioinformatics 39 (1), btac726, 2023 | 26 | 2023 |
| Scientific evidence based rare disease research discovery with research funding data in knowledge graph Q Zhu, ÐT Nguyễn, T Sheils, G Alyea, E Sid, Y Xu, J Dickens, EA Mathé, ... Orphanet Journal of Rare Diseases 16, 1-12, 2021 | 23 | 2021 |
| SmartGraph: a network pharmacology investigation platform G Zahoránszky-Kőhalmi, T Sheils, TI Oprea Journal of cheminformatics 12, 1-11, 2020 | 21 | 2020 |
| Getting started with the IDG KMC datasets and tools E Kropiwnicki, JL Binder, JJ Yang, J Holmes, A Lachmann, DJB Clarke, ... Current protocols 2 (1), e355, 2022 | 10 | 2022 |
| Smartgraph: a network pharmacology investigation platform ZK Gergely, T Sheils, TI Oprea Journal of Cheminformatics 12 (1), 2020 | 4 | 2020 |
| Overview of the Knowledge Management Center for Illuminating the Druggable Genome T Oprea, C Bologa, J Holmes, S Mathias, VT Metzger, A Waller, JJ Yang, ... Drug Discovery Today, 103882, 2024 | 2 | 2024 |
| Collaborative Use Repurposing Engine (CURE): FDA-NCATS/NIH Effort to Capture the Global Clinical Experience of Drug Repurposing to Facilitate Development of New Treatments for … H Stone, L Sacks, R Tiernan, M Duggal, T Sheils, N Southall Open forum infectious diseases 4 (Suppl 1), S12, 2017 | 1 | 2017 |
| TIN-X version 3: update with expanded dataset and modernized architecture for enhanced illumination of understudied targets VT Metzger, DC Cannon, JJ Yang, SL Mathias, CG Bologa, A Waller, ... PeerJ 12, e17470, 2024 | | 2024 |
| Pharos and TCRD: Informatics Tools for Illuminating Dark Targets KJ Kelleher, TK Sheils, SL Mathias, DT Nguyen, V Siramshetty, A Pillai, ... Open Access Databases and Datasets for Drug Discovery, 231-267, 2024 | | 2024 |
| SmartGraph API: Programmatic Knowledge Mining in Network-Pharmacology Setting G Zahoránszky-Kőhalmi, B Walker, N Miller, B Yang, DVL Penna, ... Journal of Chemical Information and Modeling, 2024 | | 2024 |
| Erratum: CATMoS: Collaborative Acute Toxicity Modeling Suite A Sayed, AH Polash, JB Brown, X Li, N Alépée, O Nicolotti, A Varnek, ... Environmental Health Perspectives 129, 2021 | | 2021 |
| Pharos: Open-source target illumination platform T Sheils, DT Nguyen, V Siramshetty, N Southall, T Oprea ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 258, 2019 | | 2019 |
| Leveling the playing field: Illuminating understudied targets with Pharos T Sheils, DT Nguyen, N Southall, T Oprea, V Siramshetty ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 257, 2019 | | 2019 |
