Marc A. Marti-Renom
Marc A. Marti-Renom
ICREA Research Professor @ CNAG-CRG
Verified email at - Homepage
Cited by
Cited by
Comparative protein structure modeling of genes and genomes
MA Martí-Renom, AC Stuart, A Fiser, R Sánchez, F Melo, A Šali
Annual review of biophysics and biomolecular structure 29 (1), 291-325, 2000
Vanilloid receptor–related osmotically activated channel (VR-OAC), a candidate vertebrate osmoreceptor
W Liedtke, Y Choe, MA Martí-Renom, AM Bell, CS Denis, AJ Hudspeth, ...
Cell 103 (3), 525-535, 2000
Exploring the three-dimensional organization of genomes: interpreting chromatin interaction data
J Dekker, MA Marti-Renom, LA Mirny
Nature Reviews Genetics 14 (6), 390-403, 2013
Tools for comparative protein structure modeling and analysis
N Eswar, B John, N Mirkovic, A Fiser, VA Ilyin, U Pieper, AC Stuart, ...
Nucleic acids research 31 (13), 3375-3380, 2003
MODBASE: a database of annotated comparative protein structure models and associated resources
U Pieper, N Eswar, FP Davis, H Braberg, MS Madhusudhan, A Rossi, ...
Nucleic acids research 34 (suppl_1), D291-D295, 2006
Protein structure modeling with MODELLER
B Webb, A Sali
Functional Genomics, 39-54, 2017
The three-dimensional folding of the α-globin gene domain reveals formation of chromatin globules
D Baů, A Sanyal, BR Lajoie, E Capriotti, M Byron, JB Lawrence, J Dekker, ...
Nature structural & molecular biology 18 (1), 107-114, 2011
Distinct structural transitions of chromatin topological domains correlate with coordinated hormone-induced gene regulation
F Le Dily, D Bau, A Pohl, GP Vicent, F Serra, D Soronellas, G Castellano, ...
Genes & development 28 (19), 2151-2162, 2014
Transcription factors orchestrate dynamic interplay between genome topology and gene regulation during cell reprogramming
R Stadhouders, E Vidal, F Serra, B Di Stefano, F Le Dily, J Quilez, ...
Nature genetics 50 (2), 238-249, 2018
MODBASE, a database of annotated comparative protein structure models, and associated resources
U Pieper, N Eswar, H Braberg, MS Madhusudhan, FP Davis, AC Stuart, ...
Nucleic acids research 32 (suppl_1), D217-D222, 2004
Protein structure modeling for structural genomics
R Sánchez, U Pieper, F Melo, N Eswar, MA Martí-Renom, ...
nature structural biology 7 (11), 986-990, 2000
The three-dimensional architecture of a bacterial genome and its alteration by genetic perturbation
MA Umbarger, E Toro, MA Wright, GJ Porreca, D Bau, SH Hong, MJ Fero, ...
Molecular cell 44 (2), 252-264, 2011
Automatic analysis and 3D-modelling of Hi-C data using TADbit reveals structural features of the fly chromatin colors
F Serra, D Baů, M Goodstadt, D Castillo, GJ Filion, MA Marti-Renom
PLoS computational biology 13 (7), e1005665, 2017
Whole-Genome Sequencing for Rapid Susceptibility Testing of M. tuberculosis
CU Köser, JM Bryant, J Becq, ME Török, MJ Ellington, MA Marti-Renom, ...
New England journal of medicine 369 (3), 290-292, 2013
Alignment of protein sequences by their profiles
MA Marti‐Renom, MS Madhusudhan, A Sali
Protein Science 13 (4), 1071-1087, 2004
EVA: continuous automatic evaluation of protein structure prediction servers
VA Eyrich, MA Martı-Renom, D Przybylski, MS Madhusudhan, A Fiser, ...
Bioinformatics 17 (12), 1242-1243, 2001
Walking along chromosomes with super-resolution imaging, contact maps, and integrative modeling
G Nir, I Farabella, C Pérez Estrada, CG Ebeling, BJ Beliveau, HM Sasaki, ...
PLoS genetics 14 (12), e1007872, 2018
Human pancreatic islet three-dimensional chromatin architecture provides insights into the genetics of type 2 diabetes
I Miguel-Escalada, S Bonŕs-Guarch, I Cebola, J Ponsa-Cobas, ...
Nature genetics 51 (7), 1137-1148, 2019
EVA: evaluation of protein structure prediction servers
IYY Koh, VA Eyrich, MA Marti-Renom, D Przybylski, MS Madhusudhan, ...
Nucleic Acids Research 31 (13), 3311-3315, 2003
A composite score for predicting errors in protein structure models
D Eramian, M Shen, D Devos, F Melo, A Sali, MA Marti‐Renom
Protein science 15 (7), 1653-1666, 2006
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