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Edwin F. Juarez
Edwin F. Juarez
Bioinformatics Scientist
Verified email at ucsd.edu - Homepage
Title
Cited by
Cited by
Year
A genome sequencing system for universal newborn screening, diagnosis, and precision medicine for severe genetic diseases
SF Kingsmore, LD Smith, CM Kunard, M Bainbridge, S Batalov, W Benson, ...
The American Journal of Human Genetics 109 (9), 1605-1619, 2022
752022
Inhibition of dual-specificity tyrosine phosphorylation-regulated kinase 2 perturbs 26S proteasome-addicted neoplastic progression
S Banerjee, T Wei, J Wang, JJ Lee, HL Gutierrez, O Chapman, SE Wiley, ...
Proceedings of the National Academy of Sciences 116 (49), 24881-24891, 2019
452019
Functional precision medicine identifies new therapeutic candidates for medulloblastoma
JM Rusert, EF Juarez, S Brabetz, J Jensen, A Garancher, LQ Chau, ...
Cancer Research 80 (23), 5393-5407, 2020
442020
Progress towards computational 3-d multicellular systems biology
P Macklin, HB Frieboes, JL Sparks, A Ghaffarizadeh, SH Friedman, ...
Systems Biology of Tumor Microenvironment: Quantitative Modeling and …, 2016
372016
Quantifying differences in cell line population dynamics using CellPD
EF Juarez, R Lau, SH Friedman, A Ghaffarizadeh, E Jonckheere, ...
BMC systems biology 10, 1-12, 2016
252016
Model-based assessment of mammalian cell metabolic functionalities using omics data
A Richelle, BP Kellman, AT Wenzel, AWT Chiang, T Reagan, ...
Cell Reports Methods 1 (3), 100040, 2021
212021
A FZD7-specific Antibody-Drug Conjugate Induces Ovarian Tumor Regression in Preclinical Models.
M Do, CCN Wu, PR Sonavane, EF Juarez, SR Adams, J Ross, RY Baena, ...
Molecular cancer therapeutics 21 (1), 113-124, 2022
192022
Imaging-Based Machine Learning Analysis of Patient-Derived Tumor Organoid Drug Response
ER Spiller, N Ung, S Kim, K Patsch, R Lau, C Strelez, C Doshi, S Choung, ...
Frontiers in Oncology 11, 771173, 2021
132021
MultiCellDS: a standard and a community for sharing multicellular data
SH Friedman, ARA Anderson, DM Bortz, AG Fletcher, HB Frieboes, ...
bioRxiv, 090696, 2016
112016
The landscape of extrachromosomal circular DNA in medulloblastoma
OS Chapman, J Luebeck, S Wani, A Tiwari, M Pagadala, S Wang, ...
bioRxiv, 2021.10. 18.464907, 2021
102021
MultiCellDS: a community-developed standard for curating microenvironment-dependent multicellular data
SH Friedman, ARA Anderson, DM Bortz, AG Fletcher, HB Frieboes, ...
bioRxiv, 090456, 2016
102016
What does your cell really do? Model-based assessment of mammalian cells metabolic functionalities using omics data
A Richelle, BP Kellman, AT Wenzel, AWT Chiang, T Reagan, ...
bioRxiv, 2020.04. 26.057943, 2020
92020
An accessible, interactive GenePattern Notebook for analysis and exploration of single-cell transcriptomic data
CK Mah, AT Wenzel, EF Juarez, T Tabor, MM Reich, JP Mesirov
F1000Research 7, 2018
92018
Systems Biology of Tumor Microenvironment
P Macklin, HB Frieboes, JL Sparks, A Ghaffarizadeh, SH Friedman, ...
Cham: Springer, 2016
82016
Automated prioritization of sick newborns for whole genome sequencing using clinical natural language processing and machine learning
B Peterson, EJ Hernandez, C Hobbs, S Malone Jenkins, B Moore, ...
Genome Medicine 15 (1), 1-9, 2023
62023
High-throughput microscopy reveals the impact of multifactorial environmental perturbations on colorectal cancer cell growth
CT Chiang, R Lau, A Ghaffarizadeh, M Brovold, D Vyas, EF Juarez, ...
GigaScience 10 (4), giab026, 2021
42021
Estimating cell cycle model parameters using systems identification
E Juarez, A Ghaffarizadeh, SH Friedman, E Jonckheere, P Macklin
bioRxiv, 035766, 2015
32015
Quantification of Cancer Cell Migration with an Integrated Experimental-Computational Pipeline
EF Juarez, C Garri, A Ghaffarizadeh, P Macklin, K Kani
bioRxiv, 130526, 2017
22017
GenePattern Notebook: An integrative analytical environment for cancer research
MM Reich, T Tabor, E Juarez, A Wenzel, T Liefeld, B Hill, D Eby, F Kim, ...
Cancer Research 82 (12_Supplement), 1903-1903, 2022
2022
EPEN-18. Oncogenic 3D genome conformations identify novel therapeutic targets in ependymoma
K Okonechnikov, A Camgöz, DE Park, O Chapman, JM Hübner, A Jenseit, ...
Neuro-Oncology 24 (Supplement_1), i42-i42, 2022
2022
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