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Mika Gustafsson
Mika Gustafsson
Professor, Department of Physics, Chemistry and Biology, Linköping University
Verified email at liu.se
Title
Cited by
Cited by
Year
The transcriptional network that controls growth arrest and differentiation in a human myeloid leukemia cell line
Nature genetics 41 (5), 553-562, 2009
4222009
Digital twins to personalize medicine
B Björnsson, C Borrebaeck, N Elander, T Gasslander, DR Gawel, ...
Genome Medicine 12 (1), 1-4, 2019
3402019
Modules, networks and systems medicine for understanding disease and aiding diagnosis
M Gustafsson, CE Nestor, H Zhang, AL Barabási, S Baranzini, S Brunak, ...
Genome medicine 6, 1-11, 2014
2052014
Therapeutic efficacy of dimethyl fumarate in relapsing-remitting multiple sclerosis associates with ROS pathway in monocytes
KE Carlström, E Ewing, M Granqvist, A Gyllenberg, S Aeinehband, ...
Nature communications 10 (1), 3081, 2019
1362019
Constructing and analyzing a large-scale gene-to-gene regulatory network Lasso-constrained inference and biological validation
M Gustafsson, M Hornquist, A Lombardi
IEEE/ACM Transactions on computational biology and bioinformatics 2 (3), 254-261, 2005
1162005
A validated single-cell-based strategy to identify diagnostic and therapeutic targets in complex diseases
DR Gawel, J Serra-Musach, S Lilja, J Aagesen, A Arenas, B Asking, ...
Genome medicine 11, 1-25, 2019
912019
DNA Methylation Changes Separate Allergic Patients from Healthy Controls and May Reflect Altered CD4+ T-Cell Population Structure
CE Nestor, F Barrenäs, H Wang, A Lentini, H Zhang, S Bruhn, R Jörnsten, ...
PLoS genetics 10 (1), e1004059, 2014
912014
Comparison and validation of community structures in complex networks
M Gustafsson, M Hörnquist, A Lombardi
Physica A: Statistical Mechanics and its Applications 367, 559-576, 2006
862006
ModuleDiscoverer: Identification of regulatory modules in protein-protein interaction networks
S Vlaic, T Conrad, C Tokarski-Schnelle, M Gustafsson, U Dahmen, ...
Scientific reports 8 (1), 433, 2018
782018
A validated gene regulatory network and GWAS identifies early regulators of T cell–associated diseases
M Gustafsson, DR Gawel, L Alfredsson, S Baranzini, J Björkander, ...
Science translational medicine 7 (313), 313ra178-313ra178, 2015
752015
5-Hydroxymethylcytosine remodeling precedes lineage specification during differentiation of human CD4+ T cells
CE Nestor, A Lentini, CH Nilsson, DR Gawel, M Gustafsson, L Mattson, ...
Cell reports 16 (2), 559-570, 2016
712016
A generally applicable translational strategy identifies S100A4 as a candidate gene in allergy
S Bruhn, Y Fang, F Barrenäs, M Gustafsson, H Zhang, A Konstantinell, ...
Science translational medicine 6 (218), 218ra4-218ra4, 2014
682014
Dynamic response genes in CD4+ T cells reveal a network of interactive proteins that classifies disease activity in multiple sclerosis
S Hellberg, D Eklund, DR Gawel, M Köpsén, H Zhang, CE Nestor, ...
Cell reports 16 (11), 2928-2939, 2016
542016
Reverse engineering of gene networks with LASSO and nonlinear basis functions
M Gustafsson, M Hörnquist, J Lundström, J Björkegren, J Tegnér
Annals of the New York Academy of Sciences 1158 (1), 265-275, 2009
502009
TET2 as a tumor suppressor and therapeutic target in T-cell acute lymphoblastic leukemia
M Bensberg, O Rundquist, A Selimović, C Lagerwall, M Benson, ...
Proceedings of the National Academy of Sciences 118 (34), e2110758118, 2021
482021
Identification of DNA methylation patterns predisposing for an efficient response to BCG vaccination in healthy BCG-naïve subjects
J Das, D Verma, M Gustafsson, M Lerm
Epigenetics 14 (6), 589-601, 2019
482019
Deriving disease modules from the compressed transcriptional space embedded in a deep autoencoder
SK Dwivedi, A Tjärnberg, J Tegnér, M Gustafsson
Nature communications 11 (1), 856, 2020
442020
Gene expression prediction by soft integration and the Elastic Net—Best performance of the DREAM3 gene expression challenge
M Gustafsson, M Hörnquist
PLoS One 5 (2), e9134, 2010
432010
Integrated genomic and prospective clinical studies show the importance of modular pleiotropy for disease susceptibility, diagnosis and treatment
M Gustafsson, M Edström, D Gawel, CE Nestor, H Wang, H Zhang, ...
Genome medicine 6, 1-12, 2014
372014
Progesterone Dampens Immune Responses in In Vitro Activated CD4+ T Cells and Affects Genes Associated With Autoimmune Diseases That Improve During …
S Hellberg, J Raffetseder, O Rundquist, R Magnusson, G Papapavlou, ...
Frontiers in Immunology 12, 672168, 2021
342021
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