Using multi-data hidden Markov models trained on local neighborhoods of protein structure to predict residue–residue contacts P Björkholm, P Daniluk, A Kryshtafovych, K Fidelis, R Andersson, ... Bioinformatics 25 (10), 1264-1270, 2009 | 63 | 2009 |
Protein structure prediction center in CASP8 A Kryshtafovych, O Krysko, P Daniluk, Z Dmytriv, K Fidelis Proteins: Structure, Function, and Bioinformatics 77 (S9), 5-9, 2009 | 48 | 2009 |
Interaction model based on local protein substructures generalizes to the entire structural enzyme-ligand space H Strömbergsson, P Daniluk, A Kryshtafovych, K Fidelis, JES Wikberg, ... Journal of chemical information and modeling 48 (11), 2278-2288, 2008 | 46 | 2008 |
CASP6 data processing and automatic evaluation at the protein structure prediction center A Kryshtafovych, M Milostan, L Szajkowski, P Daniluk, K Fidelis Proteins: Structure, Function, and Bioinformatics 61 (S7), 19-23, 2005 | 36 | 2005 |
A novel method to compare protein structures using local descriptors P Daniluk, B Lesyng BMC bioinformatics 12, 1-13, 2011 | 34 | 2011 |
New tools and expanded data analysis capabilities at the Protein Structure Prediction Center A Kryshtafovych, A Prlic, Z Dmytriv, P Daniluk, M Milostan, V Eyrich, ... Proteins: Structure, Function, and Bioinformatics 69 (S8), 19-26, 2007 | 33 | 2007 |
Ensemble of auto-encoder based and wavenet like systems for unsupervised anomaly detection P Daniluk, M Goździewski, S Kapka, M Kośmider Challenge on Detection and Classification of Acoustic Scenes and Events …, 2020 | 20 | 2020 |
ResiCon: a method for the identification of dynamic domains, hinges and interfacial regions in proteins M Dziubiński, P Daniluk, B Lesyng Bioinformatics 32 (1), 25-34, 2016 | 16 | 2016 |
From experimental, structural probability distributions to the theoretical causality analysis of molecular changes P Daniluk, M Dziubiński, B Lesyng, M Hallay-Suszek, F Rakowski, ... Computer Assisted Methods in Engineering and Science 19 (3), 257-276, 2017 | 8 | 2017 |
Implementation of a maximum clique search procedure on CUDA P Daniluk, G Firlik, B Lesyng Journal of Heuristics 25 (2), 247-271, 2019 | 5 | 2019 |
WeBIAS: a web server for publishing bioinformatics applications P Daniluk, B Wilczyński, B Lesyng BMC Research Notes 8, 1-7, 2015 | 5 | 2015 |
Theoretical and computational aspects of protein structural alignment P Daniluk, B Lesyng Computational Methods to Study the Structure and Dynamics of Biomolecules …, 2014 | 4 | 2014 |
DAMA: a method for computing multiple alignments of protein structures using local structure descriptors P Daniluk, T Oleniecki, B Lesyng Bioinformatics 38 (1), 80-85, 2022 | 3 | 2022 |
Short-Term Memory Convolutions G Stefański, K Arendt, P Daniluk, B Jasik, A Szumaczuk International Conference on Learning Representations, 2023 | 2 | 2023 |
SOI: Scaling Down Computational Complexity by Estimating Partial States of the Model G Stefański, P Daniluk, A Szumaczuk, J Tkaczuk arXiv preprint arXiv:2410.03813, 2024 | | 2024 |
Theoretical and computational aspects of protein structural alignment P Daniluk, B Lesyng Computational Methods to Study the Structure and Dynamics of Biomolecules …, 2019 | | 2019 |
Analiza podobieństwa struktur przestrzennych białek przy użyciu deskryptorów lokalnej struktury P Daniluk | | 2011 |