Ronan O'Malley
Ronan O'Malley
Joint Genome Institute, LBNL
Verified email at lbl.gov - Homepage
Title
Cited by
Cited by
Year
Highly Integrated Single-Base Resolution Maps of the Epigenome in Arabidopsis
R Lister, RC O'Malley, J Tonti-Filippini, BD Gregory, CC Berry, AH Millar, ...
Cell 133 (3), 523-536, 2008
22042008
Hotspots of aberrant epigenomic reprogramming in human induced pluripotent stem cells
R Lister, M Pelizzola, YS Kida, RD Hawkins, JR Nery, G Hon, ...
Nature 471 (7336), 68-73, 2011
14972011
Phased diploid genome assembly with single-molecule real-time sequencing
CS Chin, P Peluso, FJ Sedlazeck, M Nattestad, GT Concepcion, A Clum, ...
Nature methods 13 (12), 1050-1054, 2016
6542016
Transgenerational epigenetic instability is a source of novel methylation variants
RJ Schmitz, MD Schultz, MG Lewsey, RC O’Malley, MA Urich, O Libiger, ...
Science 334 (6054), 369-373, 2011
5072011
Cistrome and epicistrome features shape the regulatory DNA landscape
RC O’Malley, SC Huang, L Song, MG Lewsey, A Bartlett, JR Nery, M Galli, ...
Cell 165 (5), 1280-1292, 2016
4682016
A Link between RNA Metabolism and Silencing Affecting Arabidopsis Development
BD Gregory, RC O'Malley, R Lister, MA Urich, J Tonti-Filippini, H Chen, ...
Developmental cell 14 (6), 854-866, 2008
3602008
Canonical histidine kinase activity of the transmitter domain of the ETR1 ethylene receptor from Arabidopsis is not required for signal transmission
W Wang, AE Hall, R O'Malley, AB Bleecker
Proceedings of the National Academy of Sciences 100 (1), 352-357, 2003
2812003
Epigenomic diversity in a global collection of Arabidopsis thaliana accessions
T Kawakatsu, SC Huang, F Jupe, E Sasaki, RJ Schmitz, MA Urich, ...
Cell 166 (2), 492-505, 2016
2682016
Forward and reverse genetics through derivation of haploid mouse embryonic stem cells
U Elling, J Taubenschmid, G Wirnsberger, R O'Malley, SP Demers, ...
Cell stem cell 9 (6), 563-574, 2011
2212011
Ethylene‐binding activity, gene expression levels, and receptor system output for ethylene receptor family members from Arabidopsis and tomato
RC O'Malley, FI Rodriguez, JJ Esch, BM Binder, P O'Donnell, HJ Klee, ...
The Plant Journal 41 (5), 651-659, 2005
2022005
Arabidopsis seedling growth response and recovery to ethylene. A kinetic analysis
BM Binder, RC O'Malley, W Wang, JM Moore, BM Parks, EP Spalding, ...
Plant Physiology 136 (2), 2913-2920, 2004
1722004
Linking genotype to phenotype using the Arabidopsis unimutant collection
RC O’Malley, JR Ecker
The Plant Journal 61 (6), 928-940, 2010
1632010
An adapter ligation-mediated PCR method for high-throughput mapping of T-DNA inserts in the Arabidopsis genome
RC O'malley, JM Alonso, CJ Kim, TJ Leisse, JR Ecker
Nature protocols 2 (11), 2910, 2007
1452007
Signaling organogenesis in parasitic angiosperms: xenognosin generation, perception, and response
WJ Keyes, RC O'malley, D Kim, DG Lynn
Journal of Plant Growth Regulation 19 (2), 217-231, 2000
992000
Genomics of plant cell wall biogenesis
W Yong, B Link, R O’Malley, J Tewari, CT Hunter, CA Lu, X Li, ...
Planta 221 (6), 747-751, 2005
852005
A mechanism for inducing plant development: the genesis of a specific inhibitor
CE Smith, T Ruttledge, Z Zeng, RC O'Malley, DG Lynn
Proceedings of the National Academy of Sciences 93 (14), 6986-6991, 1996
761996
Mapping genome-wide transcription-factor binding sites using DAP-seq
A Bartlett, RC O'Malley, SC Huang, M Galli, JR Nery, A Gallavotti, ...
Nature protocols 12 (8), 1659, 2017
692017
Ethylene stimulates nutations that are dependent on the ETR1 receptor
BM Binder, RC O'Malley, W Wang, TC Zutz, AB Bleecker
Plant physiology 142 (4), 1690-1700, 2006
672006
Expansin message regulation in parasitic angiosperms: marking time in development
RC O’Malley, DG Lynn
The Plant Cell 12 (8), 1455-1465, 2000
652000
CrY2H-seq: a massively multiplexed assay for deep-coverage interactome mapping
SA Trigg, RM Garza, A MacWilliams, JR Nery, A Bartlett, R Castanon, ...
Nature methods 14 (8), 819-825, 2017
552017
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Articles 1–20