| The molecular signatures database hallmark gene set collection A Liberzon, C Birger, H Thorvaldsdóttir, M Ghandi, JP Mesirov, P Tamayo Cell systems 1 (6), 417-425, 2015 | 8395 | 2015 |
| Molecular signatures database (MSigDB) 3.0 A Liberzon, A Subramanian, R Pinchback, H Thorvaldsdóttir, P Tamayo, ... Bioinformatics 27 (12), 1739-1740, 2011 | 5298 | 2011 |
| A next generation connectivity map: L1000 platform and the first 1,000,000 profiles A Subramanian, R Narayan, SM Corsello, DD Peck, TE Natoli, X Lu, ... Cell 171 (6), 1437-1452. e17, 2017 | 2545 | 2017 |
| Combining clinical, pathology, and gene expression data to predict recurrence of hepatocellular carcinoma A Villanueva, Y Hoshida, C Battiston, V Tovar, D Sia, C Alsinet, ... Gastroenterology 140 (5), 1501-1512. e2, 2011 | 451 | 2011 |
| Compendium of immune signatures identifies conserved and species-specific biology in response to inflammation J Godec, Y Tan, A Liberzon, P Tamayo, S Bhattacharya, AJ Butte, ... Immunity 44 (1), 194-206, 2016 | 263 | 2016 |
| Thorvaldsdó ttir, H A Liberzon, C Birger Ghandi, M., Mesirov, JP, and Tamayo, P, 417-425, 2015 | 233 | 2015 |
| Network-based analysis of affected biological processes in type 2 diabetes models M Liu, A Liberzon, SW Kong, WR Lai, PJ Park, IS Kohane, S Kasif PLoS genetics 3 (6), e96, 2007 | 226 | 2007 |
| Using GenePattern for gene expression analysis H Kuehn, A Liberzon, M Reich, JP Mesirov Current protocols in bioinformatics 22 (1), 7.12. 1-7.12. 39, 2008 | 225 | 2008 |
| A description of the molecular signatures database (MSigDB) web site A Liberzon Stem Cell Transcriptional Networks: Methods and Protocols, 153-160, 2014 | 211 | 2014 |
| The limitations of simple gene set enrichment analysis assuming gene independence P Tamayo, G Steinhardt, A Liberzon, JP Mesirov Statistical methods in medical research 25 (1), 472-487, 2016 | 125 | 2016 |
| The molecular signatures database (MSigDB) hallmark gene set collection. Cell Syst 1: 417–425 A Liberzon, C Birger, H Thorvaldsdóttir, M Ghandi, JP Mesirov, P Tamayo | 123 | 2015 |
| The molecular signatures database (MSigDB) hallmark gene set collection. Cell Syst. 2015; 1: 417–25 A Liberzon, C Birger, H Thorvaldsdóttir, M Ghandi, JP Mesirov, P Tamayo | 110 | |
| Characterizing genomic alterations in cancer by complementary functional associations JW Kim, OB Botvinnik, O Abudayyeh, C Birger, J Rosenbluh, Y Shrestha, ... Nature biotechnology 34 (5), 539-546, 2016 | 101 | 2016 |
| GeNets: a unified web platform for network-based genomic analyses T Li, A Kim, J Rosenbluh, H Horn, L Greenfeld, D An, A Zimmer, ... Nature methods 15 (7), 543-546, 2018 | 53 | 2018 |
| Decomposing oncogenic transcriptional signatures to generate maps of divergent cellular states JW Kim, OO Abudayyeh, H Yeerna, CH Yeang, M Stewart, RW Jenkins, ... Cell systems 5 (2), 105-118. e9, 2017 | 41 | 2017 |
| Role of intrinsic DNA binding specificity in defining target genes of the mammalian transcription factor PDX1 A Liberzon, G Ridner, MD Walker Nucleic acids research 32 (1), 54-64, 2004 | 41 | 2004 |
| AraPath: a knowledgebase for pathway analysis in Arabidopsis L Lai, A Liberzon, J Hennessey, G Jiang, J Qi, JP Mesirov, SX Ge Bioinformatics 28 (17), 2291-2292, 2012 | 30 | 2012 |
| GSKB: a gene set database for pathway analysis in mouse L Lai, J Hennessey, V Bares, EW Son, Y Ban, W Wang, J Qi, G Jiang, ... bioRxiv, 082511, 2016 | 26 | 2016 |
| Unbiased transcriptome signature of in vivo cell proliferation reveals pro-and antiproliferative gene networks M Cohen, M Vecsler, A Liberzon, M Noach, E Zlotorynski, A Tzur Cell Cycle 12 (18), 2992-3000, 2013 | 23 | 2013 |
| Association of yeast SAP1, a novel member of the ‘AAA’ATPase family of proteins, with the chromatin protein SIN1 A Liberzon, S Shpungin, H Bangio, E Yona, DJ Katcoff FEBS letters 388 (1), 5-10, 1996 | 23 | 1996 |
PABLO TAMAYOProfessor, Division of Genomics and Precision Medicine, UC San DiegoVerified email at ucsd.edu
