| Solving problems with visual analytics: challenges and applications DA Keim, L Zhang, M Krstajic, S Simon I-KNOW, 1, 2011 | 75 | 2011 |
| Comparison of strand-specific transcriptomes of enterohemorrhagic Escherichia coli O157:H7 EDL933 (EHEC) under eleven different environmental conditions including radish … R Landstorfer, S Simon, S Schober, D Keim, S Scherer, K Neuhaus BMC Genomics 15 (1), 353, 2014 | 67 | 2014 |
| Bridging the gap of domain and visualization experts with a Liaison S Simon, S Mittelstädt, DA Keim, M Sedlmair Eurographics Conference on Visualization (EuroVis) 2015, 127-131, 2015 | 53 | 2015 |
| Visual Boosting in Pixel‐based Visualizations D Oelke, H Janetzko, S Simon, K Neuhaus, DA Keim Computer Graphics Forum 30 (3), 871-880, 2011 | 50 | 2011 |
| Phenotype of htgA (mbiA), a recently evolved orphan gene of Escherichia coli and Shigella, completely overlapping in antisense to yaaW L Fellner, N Bechtel, MA Witting, S Simon, P Schmitt‐Kopplin, D Keim, ... FEMS microbiology letters 350 (1), 57-64, 2014 | 38 | 2014 |
| Evidence for the recent origin of a bacterial protein-coding, overlapping orphan gene by evolutionary overprinting L Fellner, S Simon, C Scherling, M Witting, S Schober, C Polte, ... BMC evolutionary biology 15 (1), 283, 2015 | 37 | 2015 |
| Translatomics combined with transcriptomics and proteomics reveals novel functional, recently evolved orphan genes in Escherichia coli O157: H7 (EHEC) K Neuhaus, R Landstorfer, L Fellner, S Simon, A Schafferhans, ... BMC genomics 17 (1), 133, 2016 | 35 | 2016 |
| Differentiation of ncRNAs from small mRNAs in Escherichia coli O157: H7 EDL933 (EHEC) by combined RNAseq and RIBOseq–ryhB encodes the regulatory RNA RyhB and a peptide, RyhP K Neuhaus, R Landstorfer, S Simon, S Schober, PR Wright, C Smith, ... BMC genomics 18 (1), 216, 2017 | 34 | 2017 |
| Visual Comparison of Orderings and Rankings M Behrisch, J Davey, S Simon, T Schreck, D Keim, J Kohlhammer Proc. EuroVis Workshop on Visual Analytic, 2013 | 31 | 2013 |
| A novel short L-arginine responsive protein-coding gene (laoB) antiparallel overlapping to a CadC-like transcriptional regulator in Escherichia coli O157: H7 Sakai originated … SM Hücker, S Vanderhaeghen, I Abellan-Schneyder, R Wecko, S Simon, ... BMC evolutionary biology 18 (1), 21, 2018 | 22 | 2018 |
| Probiotic Enterococcus faecalis Symbioflor® down regulates virulence genes of EHEC in vitro and decrease pathogenicity in a Caenorhabditis elegans model K Neuhaus, MC Lamparter, B Zölch, R Landstorfer, S Simon, B Spanier, ... Archives of microbiology 199 (2), 203-213, 2017 | 22 | 2017 |
| Mining Rare Associations between Biological Ontologies F Benites, S Simon, E Sapozhnikova PLOS ONE 9 (1), e84475, 2014 | 19 | 2014 |
| Transcriptional and translational regulation by RNA thermometers, riboswitches and the sRNA DsrA in Escherichia coli O157: H7 Sakai under combined cold and osmotic stress … SM Hücker, S Simon, S Scherer, K Neuhaus FEMS microbiology letters 364 (2), 2017 | 18 | 2017 |
| Visual Analytics for the Prediction of Movie Rating and Box Office Performance M el Assady, D Hafner, M Hund, A Jäger, W Jentner, C Rohrdantz, ... IEEE Int. Conf. on Visual Analytics Science and Technology (VAST Challenge …, 2013 | 18 | 2013 |
| Proteomic Profiling of Serological Responses to Aspergillus fumigatus Antigens in Patients with Invasive Aspergillosis J Teutschbein, S Simon, J Lother, J Springer, P Hortschansky, CO Morton, ... Journal of proteome research 15 (5), 1580-1591, 2016 | 17 | 2016 |
| Visual analysis of next-generation sequencing data to detect overlapping genes in bacterial genomes S Simon, D Oelke, R Landstorfer, K Neuhaus, DA Keim 2011 IEEE Symposium on Biological Data Visualization (BioVis)., 47-54, 2011 | 13 | 2011 |
| Multivariate analysis of flow cytometric data using decision trees S Simon, R Guthke, T Kamradt, O Frey Frontiers in microbiology 3, 2012 | 11 | 2012 |
| VisExpress: Visual exploration of differential gene expression data S Simon, S Mittelstädt, BC Kwon, A Stoffel, R Landstorfer, K Neuhaus, ... Information Visualization 16 (1), 48-73, 2017 | 9 | 2017 |
| Draft genome sequences of three European laboratory derivatives from enterohemorrhagic Escherichia coli O157: H7 strain EDL933, including two plasmids L Fellner, C Huptas, S Simon, A Mühlig, S Scherer, K Neuhaus Genome Announcements 4 (2), e01331-15, 2016 | 8 | 2016 |
| Similarity-Driven Visual-Interactive Prediction of Movie Ratings and Box Office Results F Al-Masoudi, D Seebacher, M Schreiner, M Stein, C Rohrdantz, F Fischer, ... IEEE Int. Conf. on Visual Analytics Science and Technology (VAST Challenge …, 2013 | 6 | 2013 |
