Ole Winther
Ole Winther
Biology, Univ of Copenhagen, Genomic Medicine, Rigshospitalet and Technical University of Denmark
Verified email at bio.ku.dk - Homepage
TitleCited byYear
Autoencoding beyond pixels using a learned similarity metric
ABL Larsen, SK Sønderby, H Larochelle, O Winther
arXiv preprint arXiv:1512.09300, 2015
8102015
JASPAR, the open access database of transcription factor-binding profiles: new content and tools in the 2008 update
JC Bryne, E Valen, MHE Tang, T Marstrand, O Winther, I da Piedade, ...
Nucleic acids research 36 (suppl_1), D102-D106, 2007
7372007
The transcriptional network that controls growth arrest and differentiation in a human myeloid leukemia cell line
H Suzuki, ARR Forrest, E Van Nimwegen, CO Daub, PJ Balwierz, ...
Nature genetics 41 (5), 553, 2009
4132009
Ladder variational autoencoders
CK Sønderby, T Raiko, L Maaløe, SK Sønderby, O Winther
Advances in neural information processing systems, 3738-3746, 2016
352*2016
Auxiliary deep generative models
L Maaløe, CK Sønderby, SK Sønderby, O Winther
arXiv preprint arXiv:1602.05473, 2016
2672016
Gaussian processes for classification: Mean-field algorithms
M Opper, O Winther
Neural computation 12 (11), 2655-2684, 2000
2662000
SignalP 5.0 improves signal peptide predictions using deep neural networks
JJA Armenteros, KD Tsirigos, CK Sønderby, TN Petersen, O Winther, ...
Nature biotechnology 37 (4), 420-423, 2019
2252019
Growth-rate regulated genes have profound impact on interpretation of transcriptome profiling in Saccharomyces cerevisiae
B Regenberg, T Grotkjær, O Winther, A Fausbøll, M Åkesson, C Bro, ...
Genome biology 7 (11), R107, 2006
2142006
Bayesian non-negative matrix factorization
MN Schmidt, O Winther, LK Hansen
International Conference on Independent Component Analysis and Signal …, 2009
2072009
Mean-field approaches to independent component analysis
PA Højen-Sørensen, O Winther, LK Hansen
Neural Computation 14 (4), 889-918, 2002
1952002
A Bayesian approach to on-line learning
M Opper, O Winther
On-line learning in neural networks, 363-378, 1998
1811998
Expectation consistent approximate inference
M Opper, O Winther
Journal of Machine Learning Research 6 (Dec), 2177-2204, 2005
1772005
RSK is a principal effector of the RAS-ERK pathway for eliciting a coordinate promotile/invasive gene program and phenotype in epithelial cells
U Doehn, C Hauge, SR Frank, CJ Jensen, K Duda, JV Nielsen, ...
Molecular cell 35 (4), 511-522, 2009
1752009
Sequential neural models with stochastic layers
M Fraccaro, SK Sønderby, U Paquet, O Winther
Advances in neural information processing systems, 2199-2207, 2016
1692016
DeepLoc: prediction of protein subcellular localization using deep learning
JJ Almagro Armenteros, CK Sønderby, SK Sønderby, H Nielsen, ...
Bioinformatics 33 (21), 3387-3395, 2017
1512017
Genome-wide detection and analysis of hippocampus core promoters using DeepCAGE
E Valen, G Pascarella, A Chalk, N Maeda, M Kojima, C Kawazu, M Murata, ...
Genome research 19 (2), 255-265, 2009
1372009
BloodSpot: a database of gene expression profiles and transcriptional programs for healthy and malignant haematopoiesis
FO Bagger, D Sasivarevic, SH Sohi, LG Laursen, S Pundhir, CK Sønderby, ...
Nucleic acids research 44 (D1), D917-D924, 2016
1342016
17 Gaussian Processes and SVM: Mean Field and Leave-One-Out
M Opper, O Winther
116*1999
Adaptive and self-averaging Thouless-Anderson-Palmer mean-field theory for probabilistic modeling
M Opper, O Winther
Physical Review E 64 (5), 056131, 2001
1032001
Tractable approximations for probabilistic models: The adaptive Thouless-Anderson-Palmer mean field approach
M Opper, O Winther
Physical Review Letters 86 (17), 3695, 2001
822001
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