Reconstructing the early evolution of Fungi using a six-gene phylogeny TY James, F Kauff, CL Schoch, PB Matheny, V Hofstetter, CJ Cox, G Celio, ... Nature 443 (7113), 818-822, 2006 | 2125 | 2006 |
The Paleozoic origin of enzymatic lignin decomposition reconstructed from 31 fungal genomes D Floudas, M Binder, R Riley, K Barry, RA Blanchette, B Henrissat, ... Science 336 (6089), 1715-1719, 2012 | 1762 | 2012 |
Major clades of Agaricales: a multilocus phylogenetic overview PB Matheny, JM Curtis, V Hofstetter, MC Aime, JM Moncalvo, ZW Ge, ... Mycologia 98 (6), 982-995, 2006 | 858 | 2006 |
Contributions of rpb2 and tef1 to the phylogeny of mushrooms and allies (Basidiomycota, Fungi) PB Matheny, Z Wang, M Binder, JM Curtis, YW Lim, RH Nilsson, ... Molecular phylogenetics and evolution 43 (2), 430-451, 2007 | 469 | 2007 |
Comparative genomics of biotechnologically important yeasts R Riley, S Haridas, KH Wolfe, MR Lopes, CT Hittinger, M Göker, ... Proceedings of the National Academy of Sciences 113 (35), 9882-9887, 2016 | 326 | 2016 |
Horizontal transfer of a large and highly toxic secondary metabolic gene cluster between fungi JC Slot, A Rokas Current biology 21 (2), 134-139, 2011 | 286 | 2011 |
The evolution of fungal metabolic pathways JH Wisecaver, JC Slot, A Rokas PLoS Genetics 10 (12), 2014 | 201 | 2014 |
The evolutionary imprint of domestication on genome variation and function of the filamentous fungus Aspergillus oryzae JG Gibbons, L Salichos, JC Slot, DC Rinker, KL McGary, JG King, ... Current Biology 22 (15), 1403-1409, 2012 | 189 | 2012 |
Multiple GAL pathway gene clusters evolved independently and by different mechanisms in fungi JC Slot, A Rokas Proceedings of the National Academy of Sciences 107 (22), 10136-10141, 2010 | 161 | 2010 |
Horizontal transfer of a nitrate assimilation gene cluster and ecological transitions in fungi: a phylogenetic study JC Slot, DS Hibbett PLoS One 2 (10), e1097, 2007 | 155 | 2007 |
Genome expansion and lineage-specific genetic innovations in the forest pathogenic fungi Armillaria G Sipos, AN Prasanna, MC Walter, E O’Connor, B Bálint, K Krizsán, ... Nature ecology & evolution 1 (12), 1931-1941, 2017 | 154 | 2017 |
Evolution of a heavy metal homeostasis/resistance island reflects increasing copper stress in enterobacteria BM Staehlin, JG Gibbons, A Rokas, TV O’Halloran, JC Slot Genome biology and evolution 8 (3), 811-826, 2016 | 105 | 2016 |
Horizontal transfer and death of a fungal secondary metabolic gene cluster MA Campbell, A Rokas, JC Slot Genome biology and evolution 4 (3), 289-293, 2012 | 104 | 2012 |
The lichen symbiosis re-viewed through the genomes of Cladonia grayi and its algal partner Asterochloris glomerata D Armaleo, O Müller, F Lutzoni, ÓS Andrésson, G Blanc, HB Bode, ... BMC genomics 20, 1-33, 2019 | 102 | 2019 |
Horizontal gene cluster transfer increased hallucinogenic mushroom diversity HT Reynolds, V Vijayakumar, E Gluck‐Thaler, HB Korotkin, PB Matheny, ... Evolution Letters, 2018 | 101 | 2018 |
In silico characterization and molecular evolutionary analysis of a novel superfamily of fungal effector proteins I Stergiopoulos, YAI Kourmpetis, JC Slot, FT Bakker, PJGM De Wit, ... Molecular Biology and Evolution 29 (11), 3371-3384, 2012 | 97 | 2012 |
Physical linkage of metabolic genes in fungi is an adaptation against the accumulation of toxic intermediate compounds KL McGary, JC Slot, A Rokas Proceedings of the National Academy of Sciences 110 (28), 11481-11486, 2013 | 88 | 2013 |
Dimensions of horizontal gene transfer in eukaryotic microbial pathogens E Gluck-Thaler, JC Slot PLoS pathogens 11 (10), e1005156, 2015 | 71 | 2015 |
Psychoactive plant- and mushroom-associated alkaloids from two behavior modifying cicada pathogens G Boyce, E Gluck-Thaler, JC Slot, JE Stajich, WJ Davis, TY James, ... Fungal Ecology 41, 147-164, 2019 | 62 | 2019 |
Repeated gain and loss of a single gene modulates the evolution of vascular plant pathogen lifestyles E Gluck-Thaler, A Cerutti, AL Perez-Quintero, J Butchacas, ... Science advances 6 (46), eabc4516, 2020 | 58 | 2020 |