Valtteri Wirta
Valtteri Wirta
Department of Microbiology, Tumor and Cell biology, Karolinska Institutet
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A hypoxic niche regulates glioblastoma stem cells through hypoxia inducible factor 2α
S Seidel, BK Garvalov, V Wirta, L Von Stechow, A Schänzer, K Meletis, ...
Brain 133 (4), 983-995, 2010
p53 suppresses the self-renewal of adult neural stem cells
K Meletis, V Wirta, SM Hede, M Nistér, J Lundeberg, J Frisén
Oxford University Press for The Company of Biologists Limited 133 (2), 363-369, 2006
Versatile gene-specific sequence tags for Arabidopsis functional genomics: transcript profiling and reverse genetics applications
P Hilson, J Allemeersch, T Altmann, S Aubourg, A Avon, J Beynon, ...
Genome research 14 (10b), 2176-2189, 2004
Genome wide gene amplifications and deletions in Plasmodium falciparum
U Ribacke, BW Mok, V Wirta, J Normark, J Lundeberg, F Kironde, ...
Molecular and biochemical parasitology 155 (1), 33-44, 2007
Lab-on-DVD: standard DVD drives as a novel laser scanning microscope for image based point of care diagnostics
H Ramachandraiah, M Amasia, J Cole, P Sheard, S Pickhaver, C Walker, ...
Lab on a Chip 13 (8), 1578-1585, 2013
From cytogenetics to cytogenomics: whole-genome sequencing as a first-line test comprehensively captures the diverse spectrum of disease-causing genetic variation underlying …
A Lindstrand, J Eisfeldt, M Pettersson, C Carvalho, M Kvarnung, ...
Genome medicine 11 (1), 1-23, 2019
Rapid pulsed whole genome sequencing for comprehensive acute diagnostics of inborn errors of metabolism
H Stranneheim, M Engvall, K Naess, N Lesko, P Larsson, M Dahlberg, ...
BMC genomics 15 (1), 1-10, 2014
Whole‐genome sequencing of cytogenetically balanced chromosome translocations identifies potentially pathological gene disruptions and highlights the importance of …
D Nilsson, M Pettersson, P Gustavsson, A Förster, W Hofmeister, ...
Human mutation 38 (2), 180-192, 2017
Integration of whole genome sequencing into a healthcare setting: high diagnostic rates across multiple clinical entities in 3219 rare disease patients
H Stranneheim, K Lagerstedt-Robinson, M Magnusson, M Kvarnung, ...
Genome medicine 13 (1), 1-15, 2021
Sarek: A portable workflow for whole-genome sequencing analysis of germline and somatic variants
M Garcia, S Juhos, M Larsson, PI Olason, M Martin, J Eisfeldt, ...
F1000Research 9, 2020
CTNND2—a candidate gene for reading problems and mild intellectual disability
W Hofmeister, D Nilsson, A Topa, BM Anderlid, F Darki, H Matsson, ...
Journal of medical genetics 52 (2), 111-122, 2015
Performance of a 70-mer oligonucleotide microarray for genotyping of Campylobacter jejuni
S Rodin, AF Andersson, V Wirta, L Eriksson, M Ljungström, B Björkholm, ...
BMC microbiology 8 (1), 1-10, 2008
Replicative and non-replicative mechanisms in the formation of clustered CNVs are indicated by whole genome characterization
L Nazaryan-Petersen, J Eisfeldt, M Pettersson, J Lundin, D Nilsson, ...
PLoS genetics 14 (11), e1007780, 2018
Bioinformatory‐assisted analysis of next‐generation sequencing data for precision medicine in pancreatic cancer
L Malgerud, J Lindberg, V Wirta, M Gustafsson‐Liljefors, M Karimi, ...
Molecular oncology 11 (10), 1413-1429, 2017
Global gene expression analyses of hematopoietic stem cell-like cell lines with inducible Lhx2 expression
K Richter, V Wirta, L Dahl, S Bruce, J Lundeberg, L Carlsson, C Williams
BMC genomics 7 (1), 1-19, 2006
Novel candidate genes for atherosclerosis are identified by representational difference analysis-based transcript profiling of cholesterol-loaded macrophages
T Andersson, S Boräng, M Larsson, V Wirta, A Wennborg, J Lundeberg, ...
Pathobiology 69 (6), 304-314, 2001
Mutation C677T of methylenetetrahydrofolate reductase gene is not associated with coronary artery disease, but possibly with albuminuria, in type 2 diabetic patients
V Wirta, XH Huang, O Wirta, V Rantalaiho, A Pasternack, H Jokela, ...
Walter de Gruyter 36 (8), 625-628, 1998
Mining the Transcriptome-methods and Applications
V Wirta
KTH, 2006
Transcriptome analysis in primary neural stem cells using a tag cDNA amplification method
M Sievertzon, V Wirta, A Mercer, K Meletis, R Erlandsson, L Wikström, ...
BMC neuroscience 6 (1), 1-13, 2005
Endonuclease specificity and sequence dependence of type IIS restriction enzymes
S Lundin, A Jemt, F Terje-Hegge, N Foam, E Pettersson, M Käller, V Wirta, ...
PloS one 10 (1), e0117059, 2015
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Articles 1–20