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Yuqi Gary Zhang
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Charge transfer in dynamical biosystems, or the treachery of (static) images
DN Beratan, C Liu, A Migliore, NF Polizzi, SS Skourtis, P Zhang, Y Zhang
Accounts of chemical research 48 (2), 474-481, 2015
1832015
Biological charge transfer via flickering resonance
Y Zhang, C Liu, A Balaeff, SS Skourtis, DN Beratan
Proceedings of the National Academy of Sciences 111 (28), 10049-10054, 2014
1762014
AutoDock CrankPep: combining folding and docking to predict protein–peptide complexes
Y Zhang, MF Sanner
Bioinformatics 35 (24), 5121-5127, 2019
1032019
Discovery of key physicochemical, structural, and spatial properties of RNA‐targeted bioactive ligands
BS Morgan, JE Forte, RN Culver, Y Zhang, AE Hargrove
Angewandte Chemie International Edition 56 (43), 13498-13502, 2017
1012017
R-BIND: an interactive database for exploring and developing RNA-targeted chemical probes
BS Morgan, BG Sanaba, A Donlic, DB Karloff, JE Forte, Y Zhang, ...
ACS chemical biology 14 (12), 2691-2700, 2019
622019
Engineering nanometre-scale coherence in soft matter
C Liu, L Xiang, Y Zhang, P Zhang, DN Beratan, Y Li, N Tao
Nature Chemistry 8 (10), 941-945, 2016
612016
Charge transport across DNA-based three-way junctions
RM Young, APN Singh, AK Thazhathveetil, VY Cho, Y Zhang, N Renaud, ...
Journal of the American Chemical Society 137 (15), 5113-5122, 2015
512015
Benchmarking refined and unrefined AlphaFold2 structures for hit discovery
Y Zhang, M Vass, D Shi, E Abualrous, JM Chambers, N Chopra, C Higgs, ...
Journal of Chemical Information and Modeling 63 (6), 1656-1667, 2023
462023
Charge splitters and charge transport junctions based on guanine quadruplexes
R Sha, L Xiang, C Liu, A Balaeff, Y Zhang, P Zhang, Y Li, DN Beratan, ...
Nature nanotechnology 13 (4), 316-321, 2018
452018
Docking Flexible Cyclic Peptides with AutoDock CrankPep
Y Zhang, MF Sanner
Journal of chemical theory and computation 15 (10), 5161-5168, 2019
362019
AutoGridFR: improvements on AutoDock affinity maps and associated software tools
Y Zhang, S Forli, A Omelchenko, MF Sanner
Journal of computational chemistry 40 (32), 2882-2886, 2019
342019
Effects of the backbone and chemical linker on the molecular conductance of nucleic acid duplexes
E Beall, S Ulku, C Liu, E Wierzbinski, Y Zhang, Y Bae, P Zhang, C Achim, ...
Journal of the American Chemical Society 139 (19), 6726-6735, 2017
342017
Conformationally gated charge transfer in DNA three-way junctions
Y Zhang, RM Young, AK Thazhathveetil, APN Singh, C Liu, YA Berlin, ...
The Journal of Physical Chemistry Letters 6 (13), 2434-2438, 2015
262015
DNA charge transport: Moving beyond 1D
Y Zhang, WB Zhang, C Liu, P Zhang, A Balaeff, DN Beratan
Surface Science 652, 33-38, 2016
212016
Diverse optimal molecular libraries for organic light-emitting diodes
C Rupakheti, R Al-Saadon, Y Zhang, AM Virshup, P Zhang, W Yang, ...
Journal of Chemical Theory and Computation 12 (4), 1942-1952, 2016
192016
Hydrothermal synthesis of an ortho-metallated Co (III) complex anchored by a carboxylate group with a selective oxidation catalytic property
SY Zhang, W Shi, JG Ma, YQ Zhang, ZJ Zhang, P Cheng
Dalton Transactions 42 (12), 4313-4318, 2013
112013
C‐terminal residues of activated protein C light chain contribute to its anticoagulant and cytoprotective activities
A Yamashita, Y Zhang, MF Sanner, JH Griffin, LO Mosnier
Journal of Thrombosis and Haemostasis 18 (5), 1027-1038, 2020
52020
Development of lower cost sampling methods to accelerate the discovery of CARM1 inhibitors
Y Zhang, L Du, C Rupakheti, Q Wang, D Beratan
ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 252, 2016
2016
A Symphony of Charge Transfer Theory, Conductive DNA Junction Modeling and Chemical Library Design
Y Zhang
Duke University, 2016
2016
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Articles 1–19