| Bioconda: sustainable and comprehensive software distribution for the life sciences B Grüning, R Dale, A Sjödin, BA Chapman, J Rowe, CH Tomkins-Tinch, ... Nature methods 15 (7), 475-476, 2018 | 254 | 2018 |
| The Sweden Cancerome Analysis Network-Breast (SCAN-B) Initiative: a large-scale multicenter infrastructure towards implementation of breast cancer genomic analyses in the … LH Saal, J Vallon-Christersson, J Häkkinen, C Hegardt, D Grabau, ... Genome medicine 7 (1), 1-12, 2015 | 65 | 2015 |
| Contralateral breast cancer can represent a metastatic spread of the first primary tumor: determination of clonal relationship between contralateral breast cancers using next … S Alkner, MHE Tang, C Brueffer, M Dahlgren, Y Chen, E Olsson, C Winter, ... Breast Cancer Research 17 (1), 102, 2015 | 26 | 2015 |
| Clinical value of RNA sequencing–based classifiers for prediction of the five conventional breast cancer biomarkers: a report from the population-based multicenter sweden … C Brueffer, J Vallon-Christersson, D Grabau, A Ehinger, J Häkkinen, ... JCO Precision Oncology 2, 1-18, 2018 | 24 | 2018 |
| Remarkable similarities of chromosomal rearrangements between primary human breast cancers and matched distant metastases as revealed by whole-genome sequencing. ME Tang, M Dahlgren, C Brueffer, T Tjitrowirjo, C Winter, Y Chen, ... Oncotarget, 2015 | 22 | 2015 |
| TopHat-Recondition: a post-processor for TopHat unmapped reads C Brueffer, LH Saal BMC bioinformatics 17 (1), 199, 2016 | 7 | 2016 |
| Detection of circulating tumor cells and circulating tumor DNA before and after mammographic breast compression in a cohort of breast cancer patients scheduled for neoadjuvant … D Förnvik, KE Aaltonen, Y Chen, AM George, C Brueffer, R Rigo, ... Breast Cancer Research and Treatment 177 (2), 447-455, 2019 | 3 | 2019 |
| SARS-CoV-2 and COVID-19: An Evolving Review of Diagnostics and Therapeutics HM Rando, CS Greene, MP Robson, SM Boca, N Wellhausen, R Lordan, ... Manubot, 2020 | 2 | 2020 |
| SVCurator: A Crowdsourcing app to visualize evidence of structural variants for the human genome LM Chapman, N Spies, P Pai, CS Lim, A Carroll, G Narzisi, CM Watson, ... BioRxiv, 581264, 2019 | 2 | 2019 |
| Biopython Project Update 2017 S Singh, C Brueffer, P Cock | 2 | 2017 |
| The Mutational Landscape of the SCAN-B Real-World Primary Breast Cancer Transcriptome C Brueffer, S Gladchuk, C Winter, J Vallon-Christersson, C Hegardt, ... BioRxiv, 2020 | 1 | 2020 |
| Quality Control and Analysis of RNA-seq Data from Breast Cancer Tumor Samples C Brueffer Lund University, 2013 | 1 | 2013 |
| Abstract CT074: Pre-existing ESR1 mutations in early-stage primary breast cancer predict failure of endocrine therapy and poor survival M Dahlgren, AM George, C Brueffer, S Gladchuk, Y Chen, ... Cancer Research 80 (16 Supplement), CT074-CT074, 2020 | | 2020 |
| A crowdsourced set of curated structural variants for the human genome LM Chapman, N Spies, P Pai, CS Lim, A Carroll, G Narzisi, CM Watson, ... PLoS computational biology 16 (6), e1007933, 2020 | | 2020 |
| Defining the mutational landscape of 3,217 primary breast cancer transcriptomes through large-scale RNA-seq within the Sweden Cancerome Analysis Network: Breast Project (SCAN-B … C Brueffer, S Gladchuk, C Winter, J Vallon-Christersson, C Hegardt, ... Journal of Clinical Oncology 38 (15_suppl), 518-518, 2020 | | 2020 |
| Features of increased malignancy in eosinophilic clear cell renal cell carcinoma H Nilsson, D Lindgren, H Axelson, C Brueffer, LH Saal, J Lundgren, ... The Journal of Pathology, 2020 | | 2020 |
| Plasma circulating tumor DNA as a genomic biomarker for ovarian cancer Y Nanki, AM George, Y Chen, C Brueffer, A Hirasawa, T Chiyoda, ... EUROPEAN JOURNAL OF HUMAN GENETICS 27, 1670-1671, 2019 | | 2019 |
| Abstract P4-09-03: On the development and clinical value of RNA-sequencing-based classifiers for prediction of the five conventional breast cancer biomarkers: A report from the … C Brueffer, J Vallon-Christersson, D Grabau, A Ehinger, J Häkkinen, ... San Antonio Breast Cancer Symposium, 2017 78 (4), 2018 | | 2018 |
| Abstract P2-02-09: Breast cancer subtype distribution and circulating tumor DNA in response to neoadjuvant chemotherapy: Experiences from a preoperative cohort within SCAN-B N Loman, Y Chen, K Aaltonen, C Brueffer, A George, L Zander, ... San Antonio Breast Cancer Symposium, 2017 78 (4), 2018 | | 2018 |
| Biopython Project Update 2016 C Brueffer, T Antao, P Cock, E Talevich, M de Hoon, W Arindrarto, ... | | 2016 |
Lao H SaalAssociate Professor, Lund UniversityVerified email at med.lu.se
