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Christian Brueffer
Christian Brueffer
InSilico Consulting AB & Lund University, Sweden
Verified email at insilico.consulting - Homepage
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Cited by
Cited by
Year
Bioconda: sustainable and comprehensive software distribution for the life sciences
B Grüning, R Dale, A Sjödin, BA Chapman, J Rowe, CH Tomkins-Tinch, ...
Nature methods 15 (7), 475-476, 2018
6352018
The Sweden Cancerome Analysis Network-Breast (SCAN-B) Initiative: a large-scale multicenter infrastructure towards implementation of breast cancer genomic analyses in the …
LH Saal, J Vallon-Christersson, J Häkkinen, C Hegardt, D Grabau, ...
Genome medicine 7 (1), 1-12, 2015
1312015
Clinical value of RNA sequencing–based classifiers for prediction of the five conventional breast cancer biomarkers: a report from the population-based multicenter Sweden …
C Brueffer, J Vallon-Christersson, D Grabau, A Ehinger, J Häkkinen, ...
JCO Precision Oncology 2, 1-18, 2018
1152018
PrecisionFDA Truth Challenge V2: Calling variants from short and long reads in difficult-to-map regions
ND Olson, J Wagner, J McDaniel, SH Stephens, ST Westreich, ...
Cell Genomics 2 (5), 100129, 2022
692022
Dietary supplements and nutraceuticals under investigation for COVID-19 prevention and treatment
R Lordan, HM Rando, CS Greene
Msystems 6 (3), e00122-21, 2021
552021
Bioconda: Sustainable and comprehensive software distribution for the life sciences
R Dale, B Grüning, A Sjödin, J Rowe, BA Chapman, CH Tomkins-Tinch, ...
Nature Methods 15 (7), 475-476, 2018
372018
Contralateral breast cancer can represent a metastatic spread of the first primary tumor: determination of clonal relationship between contralateral breast cancers using next …
S Alkner, MHE Tang, C Brueffer, M Dahlgren, Y Chen, E Olsson, C Winter, ...
Breast Cancer Research 17, 1-10, 2015
322015
The mutational landscape of the SCAN‐B real‐world primary breast cancer transcriptome
C Brueffer, S Gladchuk, C Winter, J Vallon‐Christersson, C Hegardt, ...
EMBO molecular medicine 12 (10), e12118, 2020
312020
Remarkable similarities of chromosomal rearrangements between primary human breast cancers and matched distant metastases as revealed by whole-genome sequencing.
ME Tang, M Dahlgren, C Brueffer, T Tjitrowirjo, C Winter, Y Chen, ...
Oncotarget, 2015
312015
Pathogenesis, symptomatology, and transmission of SARS-CoV-2 through analysis of viral genomics and structure
HM Rando, AL MacLean, AJ Lee, R Lordan, S Ray, V Bansal, AN Skelly, ...
Msystems 6 (5), e00095-21, 2021
292021
Identification and Development of Therapeutics for COVID-19
HM Rando, N Wellhausen, S Ghosh, AJ Lee, AA Dattoli, F Hu, JB Byrd, ...
Msystems 6 (6), e00233-21, 2021
192021
Detection of circulating tumor cells and circulating tumor DNA before and after mammographic breast compression in a cohort of breast cancer patients scheduled for neoadjuvant …
D Förnvik, KE Aaltonen, Y Chen, AM George, C Brueffer, R Rigo, ...
Breast Cancer Research and Treatment 177, 447-455, 2019
152019
Clinical value of RNA sequencing–based classifiers for prediction of the five conventional breast cancer biomarkers: a report from the population-based multicenter Sweden …
C Brueffer, J Vallon-Christersson, D Grabau, A Ehinger, J Häkkinen, ...
Epub 2018/03/09. doi: 10.1200/po. 17.00135. PubMed PMID: 32913985, 2018
122018
SARS-CoV-2 and COVID-19: An evolving review of diagnostics and therapeutics
HM Rando, CS Greene, MP Robson, SM Boca, N Wellhausen, R Lordan, ...
Manubot, 2021
112021
Features of increased malignancy in eosinophilic clear cell renal cell carcinoma
H Nilsson, D Lindgren, H Axelson, C Brueffer, LH Saal, J Lundgren, ...
The Journal of Pathology 252 (4), 384-397, 2020
112020
Preexisting Somatic Mutations of Estrogen Receptor Alpha (ESR1) in Early-Stage Primary Breast Cancer
M Dahlgren, AM George, C Brueffer, S Gladchuk, Y Chen, ...
JNCI Cancer Spectrum 5 (2), pkab028, 2021
102021
TopHat-Recondition: a post-processor for TopHat unmapped reads
C Brueffer, LH Saal
BMC bioinformatics 17, 1-3, 2016
92016
Clinical associations of ESR2 (estrogen receptor beta) expression across thousands of primary breast tumors
H Dalal, M Dahlgren, S Gladchuk, C Brueffer, SK Gruvberger-Saal, ...
Scientific Reports 12 (1), 1-12, 2022
82022
A crowdsourced set of curated structural variants for the human genome
LM Chapman, N Spies, P Pai, CS Lim, A Carroll, G Narzisi, CM Watson, ...
PLoS computational biology 16 (6), e1007933, 2020
52020
SVCurator: a crowdsourcing app to visualize evidence of structural variants for the human genome
LM Chapman, N Spies, P Pai, CS Lim, A Carroll, G Narzisi, CM Watson, ...
BioRxiv, 581264, 2019
42019
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