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Jonas Reeb
Jonas Reeb
Verifierad e-postadress på abbvie.com
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The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens
N Zhou, Y Jiang, TR Bergquist, AJ Lee, BZ Kacsoh, AW Crocker, ...
Genome biology 20 (1), 1-23, 2019
3512019
LocTree3 prediction of localization
T Goldberg, M Hecht, T Hamp, T Karl, G Yachdav, N Ahmed, U Altermann, ...
Nucleic acids research 42 (W1), W350-W355, 2014
3162014
TMSEG: Novel prediction of transmembrane helices
M Bernhofer, E Kloppmann, J Reeb, B Rost
Proteins: Structure, Function, and Bioinformatics 84 (11), 1706-1716, 2016
542016
The landscape of GWAS validation; systematic review identifying 309 validated non-coding variants across 130 human diseases
AJ Alsheikh, S Wollenhaupt, EA King, J Reeb, S Ghosh, LR Stolzenburg, ...
BMC medical genomics 15 (1), 74, 2022
352022
Evaluation of transmembrane helix predictions in 2014
J Reeb, E Kloppmann, M Bernhofer, B Rost
Proteins: Structure, Function, and Bioinformatics 83 (3), 473-484, 2015
352015
Secondary Structure Prediction
J Reeb, B Rost
Elsevier, 2018
332018
Variant effect predictions capture some aspects of deep mutational scanning experiments
J Reeb, T Wirth, B Rost
BMC bioinformatics 21, 1-12, 2020
312020
Common sequence variants affect molecular function more than rare variants?
Y Mahlich, J Reeb, M Hecht, M Schelling, TAP De Beer, Y Bromberg, ...
Scientific reports 7 (1), 1608, 2017
262017
Predicted molecular effects of sequence variants link to system level of disease
J Reeb, M Hecht, Y Mahlich, Y Bromberg, B Rost
PLoS computational biology 12 (8), e1005047, 2016
222016
Predictive methods using protein sequences
J Reeb, T Goldberg, Y Ofran, B Rost
Bioinformatics 185, 2020
42020
ISMB 2014 Proceedings Papers Committee
S Batzoglu, R Schwartz, T Lengauer, B Bioimaging, S Kasif, D Heckerman, ...
1*
Machine learning reveals genetic modifiers of the immune microenvironment of cancer
B Riley-Gillis, SW Tsaih, E King, S Wollenhaupt, J Reeb, AR Peck, ...
Iscience 26 (9), 2023
2023
Assessment of variant effect prediction
J Reeb
Technische Universität München, 2020
2020
Protein Secondary Structure Prediction in 2018
E Kloppmann, J Reeb, P Hoenigschmid, B Rost
Encyclopedia of Biophysics, 2019
2019
Membrane Protein Structure
M Punta, E Kloppmann, J Reeb
Encyclopedia of Biophysics, 2019
2019
Establishment of an interdisciplinary workflow of machine learning-based Radiomics in sarcoma patients
JC Peeken, C Knie, V Golkov, K Kessel, F Pasa, Q Khan, M Seroglazov, ...
STRAHLENTHERAPIE UND ONKOLOGIE 193, S174-S174, 2017
2017
ISMB/ECCB 2009 Proceedings papers committee
IG Costa, A Schönhuth, C Hafemeister, A Schliep, Y Huang, S Wuchty, ...
Bioinformatics 25 (12), i119-i1127, 2009
2009
Supporting online material (SOM) for
Y Mahlich, J Reeb, M Hecht, TAP De Beer, Y Bromberg, B Rost
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Artiklar 1–18