Peter Menzel
Peter Menzel
Labor Berlin
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Cited by
Cited by
Fast and sensitive taxonomic classification for metagenomics with Kaiju
P Menzel, KL Ng, A Krogh
Nature Communications 7, 11257, 2016
Comparative metagenomics of eight geographically remote terrestrial hot springs
P Menzel, SR Gudbergsdóttir, AG Rike, L Lin, Q Zhang, P Contursi, ...
Microbial ecology 70 (2), 411-424, 2015
The tedious task of finding homologous noncoding RNA genes
P Menzel, J Gorodkin, PF Stadler
RNA 15 (12), 2075-2082, 2009
Novel viral genomes identified from six metagenomes reveal wide distribution of archaeal viruses and high viral diversity in terrestrial hot springs
SR Gudbergsdóttir, P Menzel, A Krogh, M Young, X Peng
Environmental microbiology 18 (3), 863-874, 2016
The PETfold and PETcofold web servers for intra-and intermolecular structures of multiple RNA sequences
SE Seemann, P Menzel, R Backofen, J Gorodkin
Nucleic acids research 39 (suppl_2), W107-W111, 2011
Discovering novel hydrolases from hot environments
R Wohlgemuth, J Littlechild, D Monti, K Schnorr, T van Rossum, B Siebers, ...
Biotechnology advances 36 (8), 2077-2100, 2018
Isolation and characterization of the first xylanolytic hyperthermophilic euryarchaeon Thermococcus sp. strain 2319x1 and its unusual multidomain glycosidase
SN Gavrilov, C Stracke, K Jensen, P Menzel, V Kallnik, A Slesarev, ...
Frontiers in Microbiology 7, 552, 2016
A gene expression atlas of embryonic neurogenesis in Drosophila reveals complex spatiotemporal regulation of lncRNAs
AL McCorkindale, P Wahle, S Werner, I Jungreis, P Menzel, CJ Shukla, ...
Development 146 (6), 2019
RILogo: visualizing RNA–RNA interactions
P Menzel, SE Seemann, J Gorodkin
Bioinformatics 28 (19), 2523-2526, 2012
maxAlike: maximum likelihood-based sequence reconstruction with application to improved primer design for unknown sequences
P Menzel, PF Stadler, J Gorodkin
Bioinformatics 27 (3), 317-325, 2011
Sugar metabolism of the first thermophilic planctomycete Thermogutta terrifontis: comparative genomic and transcriptomic approaches
AG Elcheninov, P Menzel, SR Gudbergsdottir, AI Slesarev, VV Kadnikov, ...
Frontiers in microbiology 8, 2140, 2017
Transcriptional dynamics of microRNAs and their targets during Drosophila neurogenesis
P Menzel, AL McCorkindale, SR Stefanov, RP Zinzen, IM Meyer
RNA biology 16 (1), 69-81, 2019
On the Accuracy of Short Read Mapping
P Menzel, J Frellsen, M Plass, SH Rasmussen, A Krogh
Deep Sequencing Data Analysis, 39-59, 2013
BIQ: A method for searching circular RNAs in transcriptome databases by indexing backsplice junctions
P Menzel, IM Meyer
bioRxiv, 556993, 2019
Algorithms for mapping high-throughput DNA sequences
J Frellsen, P Menzel, A Krogh
Comprehensive Biomedical Physics, 41-50, 2014
Maximum likelihood estimation of weight matrices for targeted homology search
P Menzel, J Gorodkin, PF Stadler
Lecture Notes in Informatics: Proceedings of the German Conference on …, 2009
Taxonomic classification method for metagenomics based on core protein families with Core-Kaiju
A Tovo, P Menzel, A Krogh, M Cosentino Lagomarsino, S Suweis
Nucleic acids research 48 (16), e93-e93, 2020
Tanimoto’s Best Barbecue: Discovering regulatory modules using tanimoto scores
P Menzel, PF Stadler, A Mosig
German Conference on Bioinformatics (GCB 2007) 115, 68-77, 2007
Draft Genome Sequence of Mycobacteroides sp. Strain LB1, Isolated from the Sputum of a Cystic Fibrosis Patient
P Menzel, R Schwarzer, J Helmuth, I Friesen
Microbiology Resource Announcements 9 (47), 2020
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