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Zhonghui Tang
Zhonghui Tang
Verified email at mail.sysu.edu.cn
Title
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Cited by
Year
CTCF-mediated human 3D genome architecture reveals chromatin topology for transcription
Z Tang, OJ Luo, X Li, M Zheng, JJ Zhu, P Szalaj, P Trzaskoma, ...
Cell 163 (7), 1611-1627, 2015
9612015
The energetics and physiological impact of cohesin extrusion
L Vian, A Pękowska, SSP Rao, KR Kieffer-Kwon, S Jung, L Baranello, ...
Cell 173 (5), 1165-1178. e20, 2018
5142018
Super-enhancers delineate disease-associated regulatory nodes in T cells
OSJJ Vahedi G, Kanno Y, Furumoto Y, Jiang K, Parker SC, Erdos MR, Davis SR ...
Nature, 2015
3692015
Interactome maps of mouse gene regulatory domains reveal basic principles of transcriptional regulation
CR Kieffer-Kwon KR, Tang Z, Mathe E, Qian J, Sung MH
Cell 155 (7), 1507, 2013
3442013
B cell super-enhancers and regulatory clusters recruit AID tumorigenic activity
Cell 18 (159(7)), 1524-37, 2014
269*2014
The tandem duplicator phenotype is a prevalent genome-wide cancer configuration driven by distinct gene mutations
F Menghi, FP Barthel, V Yadav, M Tang, B Ji, Z Tang, GW Carter, Y Ruan, ...
Cancer cell 34 (2), 197-210. e5, 2018
1442018
Long-read ChIA-PET for base-pair-resolution mapping of haplotype-specific chromatin interactions
X Li, OJ Luo, P Wang, M Zheng, D Wang, E Piecuch, JJ Zhu, SZ Tian, ...
Nature protocols 12 (5), 899-915, 2017
1072017
The primordial differentiation of tumor-specific memory CD8+ T cells as bona fide responders to PD-1/PD-L1 blockade in draining lymph nodes
Q Huang, X Wu, Z Wang, X Chen, L Wang, Y Lu, D Xiong, Q Liu, Y Tian, ...
Cell 185 (22), 4049-4066. e25, 2022
1052022
STAT5-mediated chromatin interactions in superenhancers activate IL-2 highly inducible genes: Functional dissection of the Il2ra gene locus
P Li, S Mitra, R Spolski, J Oh, W Liao, Z Tang, F Mo, X Li, EE West, ...
Proceedings of the National Academy of Sciences 114 (46), 12111-12119, 2017
812017
An integrated 3-dimensional genome modeling engine for data-driven simulation of spatial genome organization
P Szałaj, Z Tang, P Michalski, MJ Pietal, OJ Luo, M Sadowski, X Li, ...
Genome research 26 (12), 1697-1709, 2016
472016
3D-GNOME: an integrated web service for structural modeling of the 3D genome
P Szalaj, PJ Michalski, P Wróblewski, Z Tang, M Kadlof, G Mazzocco, ...
Nucleic acids research 44 (W1), W288-W293, 2016
422016
Spatial chromatin architecture alteration by structural variations in human genomes at the population scale
M Sadowski, A Kraft, P Szalaj, M Wlasnowolski, Z Tang, Y Ruan, ...
Genome biology 20, 1-27, 2019
402019
Spatial transcriptomics prediction from histology jointly through transformer and graph neural networks
Y Zeng, Z Wei, W Yu, R Yin, Y Yuan, B Li, Z Tang, Y Lu, Y Yang
Briefings in Bioinformatics 23 (5), bbac297, 2022
342022
ChIA-PIPE: a fully automated pipeline for comprehensive ChIA-PET data analysis and visualization
B Lee, J Wang, L Cai, M Kim, S Namburi, H Tjong, Y Feng, P Wang, ...
Science advances 6 (28), eaay2078, 2020
212020
3D-GNOME 2.0: a three-dimensional genome modeling engine for predicting structural variation-driven alterations of chromatin spatial structure in the human genome
M Wlasnowolski, M Sadowski, T Czarnota, K Jodkowska, P Szalaj, Z Tang, ...
Nucleic Acids Research 48 (W1), W170-W176, 2020
172020
Genome-wide histone H3K27 acetylation profiling identified genes correlated with prognosis in papillary thyroid carcinoma
L Zhang, D Xiong, Q Liu, Y Luo, Y Tian, X Xiao, Y Sang, Y Liu, S Hong, ...
Frontiers in cell and developmental biology 9, 682561, 2021
132021
Chromatin topology reorganization and transcription repression by PML-RARα in acute promyeloid leukemia
P Wang, Z Tang, B Lee, JJ Zhu, L Cai, P Szalaj, SZ Tian, M Zheng, ...
Genome biology 21, 1-21, 2020
132020
Methods for comparative ChIA-PET and Hi-C data analysis
D Capurso, Z Tang, Y Ruan
Methods 170, 69-74, 2020
112020
The niche-specialist and age-related oral microbial ecosystem: crosstalk with host immune cells in homeostasis
D Lin, Q Hu, L Yang, X Zeng, Y Xiao, D Wang, W Dai, H Lu, J Fang, ...
Microbial Genomics 8 (6), 000811, 2022
52022
PROST: quantitative identification of spatially variable genes and domain detection in spatial transcriptomics
Y Liang, G Shi, R Cai, Y Yuan, Z Xie, L Yu, Y Huang, Q Shi, L Wang, J Li, ...
Nature Communications 15 (1), 600, 2024
2024
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