The initial state of the human gut microbiome determines its reshaping by antibiotics F Raymond, AA Ouameur, M Déraspe, N Iqbal, H Gingras, B Dridi, ... The ISME journal 10 (3), 707-720, 2016 | 181 | 2016 |
The resistome of Pseudomonas aeruginosa in relationship to phenotypic susceptibility VN Kos, M Déraspe, RE McLaughlin, JD Whiteaker, PH Roy, RA Alm, ... Antimicrobial agents and chemotherapy 59 (1), 427-436, 2015 | 180 | 2015 |
Predictive computational phenotyping and biomarker discovery using reference-free genome comparisons A Drouin, S Giguère, M Déraspe, M Marchand, M Tyers, VG Loo, ... BMC genomics 17 (1), 1-15, 2016 | 66 | 2016 |
Complete sequence of pOZ176, a 500-kilobase IncP-2 plasmid encoding IMP-9-mediated carbapenem resistance, from outbreak isolate Pseudomonas aeruginosa 96 J Xiong, DC Alexander, JH Ma, M Déraspe, DE Low, FB Jamieson, ... Antimicrobial agents and chemotherapy 57 (8), 3775-3782, 2013 | 61 | 2013 |
Partial recovery of microbiomes after antibiotic treatment F Raymond, M Déraspe, M Boissinot, MG Bergeron, J Corbeil Gut Microbes 7 (5), 428-434, 2016 | 23 | 2016 |
Phenetic comparison of prokaryotic genomes using k-mers M Déraspe, F Raymond, S Boisvert, A Culley, PH Roy, F Laviolette, ... Molecular biology and evolution 34 (10), 2716-2729, 2017 | 15 | 2017 |
Genome and plasmid analysis of blaIMP-4-carrying Citrobacter freundii B38 J Xiong, M Déraspe, N Iqbal, J Ma, FB Jamieson, J Wasserscheid, ... Antimicrobial agents and chemotherapy 60 (11), 6719-6725, 2016 | 15 | 2016 |
Genomic analysis of Pseudomonas aeruginosa PA96, the host of carbapenem resistance plasmid pOZ176 M Déraspe, DC Alexander, J Xiong, JH Ma, DE Low, FB Jamieson, ... FEMS microbiology letters 356 (2), 212-216, 2014 | 15 | 2014 |
A blaVIM-2 plasmid disseminating in extensively drug-resistant clinical Pseudomonas aeruginosa and Serratia marcescens isolates E Vilacoba, C Quiroga, M Pistorio, A Famiglietti, H Rodríguez, J Kovensky, ... Antimicrobial agents and chemotherapy 58 (11), 7017-7018, 2014 | 12 | 2014 |
Complete genome of a panresistant Pseudomonas aeruginosa strain, isolated from a patient with respiratory failure in a Canadian community hospital J Xiong, M Déraspe, N Iqbal, S Krajden, W Chapman, K Dewar, PH Roy Genome announcements 5 (22), 2017 | 11 | 2017 |
Learning interpretable models of phenotypes from whole genome sequences with the set covering machine A Drouin, S Giguere, V Sagatovich, M Déraspe, F Laviolette, M Marchand, ... arXiv preprint arXiv:1412.1074, 2014 | 8 | 2014 |
Draft genome sequence of an international clonal lineage 1 Acinetobacter baumannii strain from Argentina E Vilacoba, M Déraspe, GM Traglia, PH Roy, MS Ramírez, D Centrón Genome announcements 2 (6), 2014 | 5 | 2014 |
a, Corbeil J, Gardner H. 2015 VN Kos, M Déraspe, RE McLaughlin, JD Whiteaker, PH Roy, R Alm The resistome of Pseudomonas aeruginosa in relationship to phenotypic …, 0 | 5 | |
Machine learning analysis identifies genes differentiating triple negative breast cancers C Kothari, MA Osseni, L Agbo, G Ouellette, M Déraspe, F Laviolette, ... Scientific reports 10 (1), 1-15, 2020 | 4 | 2020 |
Culture-enriched human gut microbiomes reveal core and accessory resistance genes F Raymond, M Boissinot, AA Ouameur, M Déraspe, PL Plante, ... Microbiome 7 (1), 56, 2019 | 4 | 2019 |
Fast protein database as a service with kAAmer M Deraspe, S Boisvert, F Laviolette, PH Roy, J Corbeil bioRxiv, 2020 | 1 | 2020 |
Making Linked Data SPARQL with the InterMine Biological Data Warehouse. M Déraspe, G Binkley, D Butano, M Chadwick, JM Cherry, J Clark-Casey, ... SWAT4LS, 2016 | 1 | 2016 |
Cross-Study Analyses of Gut Microbiomes from Healthy and Obese Individuals M Deraspe, C Burdet, JM Dominguez, F Laviolette, PH Roy, J Corbeil | | 2020 |
Genome Sequence of a Klebsiella pneumoniae NDM-1 Producer Isolated in Quebec City M Déraspe, J Longtin, PH Roy Microbiology resource announcements 9 (3), 2020 | | 2020 |
Set Covering Machines and Reference-Free Genome Comparisons Uncover Predictive Biomarkers of Antibiotic Resistance A Drouin, S Giguère, M Déraspe, M Marchand, J Corbeil, F Laviolette | | 2016 |