Natalie Castellana
Natalie Castellana
CEO, Digital Proteomics LLC
Verified email at digitalproteomics.com
Title
Cited by
Cited by
Year
Discovery and revision of Arabidopsis genes by proteogenomics
NE Castellana, SH Payne, Z Shen, M Stanke, V Bafna, SP Briggs
Proceedings of the national academy of sciences 105 (52), 21034-21038, 2008
2762008
Proteogenomics to discover the full coding content of genomes: a computational perspective
N Castellana, V Bafna
Journal of proteomics 73 (11), 2124-2135, 2010
1582010
Proteogenomic database construction driven from large scale RNA-seq data
S Woo, SW Cha, G Merrihew, Y He, N Castellana, C Guest, M MacCoss, ...
Journal of proteome research 13 (1), 21-28, 2014
1052014
An automated proteogenomic method uses mass spectrometry to reveal novel genes in Zea mays
NE Castellana, Z Shen, Y He, JW Walley, SP Briggs, V Bafna
Molecular & Cellular Proteomics 13 (1), 157-167, 2014
732014
Template proteogenomics: sequencing whole proteins using an imperfect database
NE Castellana, V Pham, D Arnott, JR Lill, V Bafna
Molecular & Cellular Proteomics 9 (6), 1260-1270, 2010
462010
Resurrection of a clinical antibody: Template proteogenomic de novo proteomic sequencing and reverse engineering of an anti‐lymphotoxin‐α antibody
NE Castellana, K McCutcheon, VC Pham, K Harden, A Nguyen, J Young, ...
Proteomics 11 (3), 395-405, 2011
292011
Plant proteogenomics: from protein extraction to improved gene predictions
B Chapman, N Castellana, A Apffel, R Ghan, GR Cramer, M Bellgard, ...
Proteomics for Biomarker Discovery, 267-294, 2013
132013
MORPH-PRO: a novel algorithm and web server for protein morphing
NE Castellana, A Lushnikov, P Rotkiewicz, N Sefcovic, PA Pevzner, ...
Algorithms for Molecular Biology 8 (1), 19, 2013
52013
Relaxing haplotype block models for association testing
N Castellana, K Dhamdhere, S Sridhar, R Schwartz
Biocomputing 2006, 454-466, 2006
32006
Proteogenomics: applications of mass spectrometry at the interface of genomics and proteomics
N Castellana
UC San Diego, 2012
12012
Serum proteomics expands on high-affinity antibodies in immunized rabbits than deep B-cell repertoire sequencing alone
SR Bonissone, T Lima, K Harris, L Davison, B Avanzino, N Trinklein, ...
bioRxiv, 833871, 2020
2020
Temporal dynamics of the serological compartment of rabbit antibody repertoires
A Patel, SR Bonissone, N Castellana
The Journal of Immunology 202 (1 Supplement), 123.16-123.16, 2019
2019
Proteomic analysis of the serum antibody repertoire: a glimpse of the hidden repertoire.
S Bonissone, A Patel, T Lima, N Castellana
MOLECULAR BIOLOGY OF THE CELL 29 (26), 2018
2018
Resurrecting an antibody against an alternative conformation of cytochrome c: the recombinant mAb 1D3
R Radi, F Tomasina, L Piacenza, N Castellana, M Goff, T Cooper, ...
Free Radical Biology and Medicine 128, S91, 2018
2018
Antibody de novo Sequencing
N Castellana, A Guthals
Analytical Characterization of Biotherapeutics, 139-153, 2017
2017
MORPH-PRO: a novel algorithm and web server for protein morphing
NE Castellana, A Lushnikov, P Rotkiewicz, N Sefcovic, PA Pevzner, ...
International Workshop on Algorithms in Bioinformatics, 262-273, 2012
2012
ASSOCIATION TESTING
N CASTELLANA, K DHAMDHERE, S SRIDHAR
Biocomputing 2006-Proceedings Of The Pacific Symposium, 454, 2005
2005
Quorum: untargeted metabolomics using tandem mass spectrometry and molecular networking
A Patel, S Bonissone, N Castellana
Tutorial: Proteogenomics
N Castellana
The system can't perform the operation now. Try again later.
Articles 1–19