| SBML Level 3: an extensible format for the exchange and reuse of biological models SM Keating, D Waltemath, M König, F Zhang, A Dräger, C Chaouiya, ... Molecular systems biology 16 (8), e9110, 2020 | 204 | 2020 |
| Path2Models: large-scale generation of computational models from biochemical pathway maps F Büchel, N Rodriguez, N Swainston, C Wrzodek, T Czauderna, R Keller, ... BMC systems biology 7, 1-19, 2013 | 176 | 2013 |
| JSBML: a flexible Java library for working with SBML A Dräger, N Rodriguez, M Dumousseau, A Dörr, C Wrzodek, N Le Novère, ... Bioinformatics 27 (15), 2167-2168, 2011 | 116 | 2011 |
| KEGGtranslator: visualizing and converting the KEGG PATHWAY database to various formats C Wrzodek, A Dräger, A Zell Bioinformatics 27 (16), 2314-2315, 2011 | 94 | 2011 |
| Identification of Dlk1-Dio3 Imprinted Gene Cluster Noncoding RNAs as Novel Candidate Biomarkers for Liver Tumor Promotion H Lempiäinen, P Couttet, F Bolognani, A Mueller, V Dubost, R Luisier, ... Toxicological sciences 131 (2), 375-386, 2013 | 78 | 2013 |
| Precise generation of systems biology models from KEGG pathways C Wrzodek, F Büchel, M Ruff, A Dräger, A Zell BMC systems biology 7, 1-12, 2013 | 75 | 2013 |
| Integrated enrichment analysis and pathway-centered visualization of metabolomics, proteomics, transcriptomics, and genomics data by using the InCroMAP software J Eichner, L Rosenbaum, C Wrzodek, HU Häring, A Zell, R Lehmann Journal of Chromatography B 966, 77-82, 2014 | 53 | 2014 |
| JSBML 1.0: providing a smorgasbord of options to encode systems biology models N Rodriguez, A Thomas, L Watanabe, IY Vazirabad, V Kofia, HF Gómez, ... Bioinformatics 31 (20), 3383-3386, 2015 | 46 | 2015 |
| InCroMAP: integrated analysis of cross-platform microarray and pathway data C Wrzodek, J Eichner, F Büchel, A Zell Bioinformatics 29 (4), 506-508, 2013 | 44 | 2013 |
| Linking the epigenome to the genome: correlation of different features to DNA methylation of CpG islands C Wrzodek, F Büchel, G Hinselmann, J Eichner, F Mittag, A Zell PloS one 7 (4), e35327, 2012 | 43 | 2012 |
| Ha‐ras and β‐catenin oncoproteins orchestrate metabolic programs in mouse liver tumors EB Unterberger, J Eichner, C Wrzodek, H Lempiäinen, R Luisier, ... International journal of cancer 135 (7), 1574-1585, 2014 | 35 | 2014 |
| Qualitative translation of relations from BioPAX to SBML qual F Büchel, C Wrzodek, F Mittag, A Dräger, J Eichner, N Rodriguez, ... Bioinformatics 28 (20), 2648-2653, 2012 | 29 | 2012 |
| Inferring statin-induced gene regulatory relationships in primary human hepatocytes A Schröder, J Wollnik, C Wrzodek, A Dräger, M Bonin, O Burk, M Thomas, ... Bioinformatics 27 (18), 2473-2477, 2011 | 27 | 2011 |
| ModuleMaster: a new tool to decipher transcriptional regulatory networks C Wrzodek, A Schröder, A Dräger, D Wanke, KW Berendzen, M Kronfeld, ... Biosystems 99 (1), 79-81, 2010 | 25 | 2010 |
| ZBIT bioinformatics toolbox: a web-platform for systems biology and expression data analysis M Römer, J Eichner, A Dräger, C Wrzodek, F Wrzodek, A Zell PloS one 11 (2), e0149263, 2016 | 24 | 2016 |
| Evaluation of toxicogenomics approaches for assessing the risk of nongenotoxic carcinogenicity in rat liver J Eichner, C Wrzodek, M Römer, H Ellinger-Ziegelbauer, A Zell PloS one 9 (5), e97678, 2014 | 23 | 2014 |
| Parkinson’s disease: dopaminergic nerve cell model is consistent with experimental finding of increased extracellular transport of α-synuclein F Büchel, S Saliger, A Dräger, S Hoffmann, C Wrzodek, A Zell, PJ Kahle Bmc Neuroscience 14, 1-12, 2013 | 22 | 2013 |
| TFpredict and SABINE: sequence-based prediction of structural and functional characteristics of transcription factors J Eichner, F Topf, A Dräger, C Wrzodek, D Wanke, A Zell PLoS One 8 (12), e82238, 2013 | 18 | 2013 |
| A toxicogenomic approach for the prediction of murine hepatocarcinogenesis using ensemble feature selection J Eichner, N Kossler, C Wrzodek, A Kalkuhl, D Bach Toft, N Ostenfeldt, ... PLoS One 8 (9), e73938, 2013 | 18 | 2013 |
| Integrative pathway-based approach for genome-wide association studies: identification of new pathways for rheumatoid arthritis and type 1 diabetes F Buechel, F Mittag, C Wrzodek, A Zell, T Gasser, M Sharma PLoS One 8 (10), e78577, 2013 | 13 | 2013 |
Andreas ZellProfessor für Informatik, Universität TübingenVerified email at uni-tuebingen.de
