Yang Cao
Yang Cao
Computer Science Department, Virginia tech
Verified email at cs.vt.edu - Homepage
Title
Cited by
Cited by
Year
Efficient step size selection for the tau-leaping simulation method
Y Cao, DT Gillespie, LR Petzold
The Journal of chemical physics 124 (4), 044109, 2006
6592006
The slow-scale stochastic simulation algorithm
Y Cao, DT Gillespie, LR Petzold
The Journal of chemical physics 122 (1), 014116, 2005
5422005
Stiffness in stochastic chemically reacting systems: The implicit tau-leaping method
M Rathinam, LR Petzold, Y Cao, DT Gillespie
The Journal of Chemical Physics 119 (24), 12784-12794, 2003
4982003
Efficient formulation of the stochastic simulation algorithm for chemically reacting systems
Y Cao, H Li, L Petzold
The journal of chemical physics 121 (9), 4059-4067, 2004
4852004
Adjoint sensitivity analysis for differential-algebraic equations: The adjoint DAE system and its numerical solution
Y Cao, S Li, L Petzold, R Serban
SIAM journal on scientific computing 24 (3), 1076-1089, 2003
3532003
Avoiding negative populations in explicit Poisson tau-leaping
Y Cao, DT Gillespie, LR Petzold
The Journal of chemical physics 123 (5), 054104, 2005
2972005
Multiscale stochastic simulation algorithm with stochastic partial equilibrium assumption for chemically reacting systems
Y Cao, D Gillespie, L Petzold
Journal of Computational Physics 206 (2), 395-411, 2005
2492005
Epidemiological modeling of news and rumors on twitter
F Jin, E Dougherty, P Saraf, Y Cao, N Ramakrishnan
Proceedings of the 7th workshop on social network mining and analysis, 1-9, 2013
2442013
Adaptive explicit-implicit tau-leaping method with automatic tau selection
Y Cao, DT Gillespie, LR Petzold
The Journal of chemical physics 126 (22), 224101, 2007
2132007
Sensitivity analysis of discrete stochastic systems
R Gunawan, Y Cao, L Petzold, FJ Doyle III
Biophysical journal 88 (4), 2530-2540, 2005
2082005
Algorithms and software for stochastic simulation of biochemical reacting systems
H Li, Y Cao, LR Petzold, DT Gillespie
Biotechnology progress 24 (1), 56-61, 2008
1962008
Consistency and stability of tau-leaping schemes for chemical reaction systems
M Rathinam, LR Petzold, Y Cao, DT Gillespie
Multiscale Modeling & Simulation 4 (3), 867-895, 2005
1162005
Adjoint sensitivity analysis for differential-algebraic equations: algorithms and software
Y Cao, S Li, L Petzold
Journal of computational and applied mathematics 149 (1), 171-191, 2002
1152002
Accuracy limitations and the measurement of errors in the stochastic simulation of chemically reacting systems
Y Cao, L Petzold
Journal of Computational Physics 212 (1), 6-24, 2006
1072006
Misinformation propagation in the age of twitter
F Jin, W Wang, L Zhao, E Dougherty, Y Cao, CT Lu, N Ramakrishnan
Computer, 90-94, 2014
1032014
Sensitivity analysis of differential-algebraic equations and partial differential equations
L Petzold, S Li, Y Cao, R Serban
Computers & chemical engineering 30 (10-12), 1553-1559, 2006
1012006
Accelerated stochastic simulation of the stiff enzyme-substrate reaction
Y Cao, DT Gillespie, LR Petzold
The Journal of chemical physics 123 (14), 144917, 2005
972005
The numerical stability of leaping methods for stochastic simulation of chemically reacting systems
Y Cao, LR Petzold, M Rathinam, DT Gillespie
The Journal of chemical physics 121 (24), 12169-12178, 2004
872004
A posteriori error estimation and global error control for ordinary differential equations by the adjoint method
Y Cao, L Petzold
SIAM Journal on Scientific Computing 26 (2), 359-374, 2004
782004
Stochastic simulation of enzyme-catalyzed reactions with disparate timescales
D Barik, MR Paul, WT Baumann, Y Cao, JJ Tyson
Biophysical journal 95 (8), 3563-3574, 2008
572008
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Articles 1–20