|Quantifying diet-induced metabolic changes of the human gut microbiome|
S Shoaie, P Ghaffari, P Kovatcheva-Datchary, A Mardinoglu, P Sen, ...
Cell metabolism 22 (2), 320-331, 2015
|Evaluation and assessment of read-mapping by multiple next-generation sequencing aligners based on genome-wide characteristics|
S Thankaswamy-Kosalai, P Sen, I Nookaew
Genomics 109 (3-4), 186–191, 2017
|Gut metabolome meets microbiome: A methodological perspective to understand the relationship between host and microbe|
S Lamichhane, P Sen, AM Dickens, M Orešič, HC Bertram
|Comparative systems analyses reveal molecular signatures of clinically tested vaccine adjuvants|
TA Olafsdottir, M Lindqvist, I Nookaew, P Andersen, J Maertzdorf, ...
Scientific reports 6, 39097, 2016
|Metabolic modeling of human gut microbiota on a genome scale: an overview|
P Sen, M Orešič
Metabolites 9 (2), 22, 2019
|Kinetic modelling of phospholipid synthesis in Plasmodium knowlesi unravels crucial steps and relative importance of multiple pathways|
P Sen, HJ Vial, O Radulescu
BMC systems biology 7 (1), 123, 2013
|An overview of metabolomics data analysis: current tools and future perspectives|
S Lamichhane, P Sen, AM Dickens, T Hyötyläinen, M Orešič
Comprehensive analytical chemistry 82, 387-413, 2018
|Selection of complementary foods based on optimal nutritional values|
P Sen, A Mardinogulu, J Nielsen
Scientific reports 7 (1), 1-9, 2017
|Perspectives on systems modeling of human peripheral blood mononuclear cells|
P Sen, E Kemppainen, M Orešič
Frontiers in molecular biosciences 4, 96, 2018
|Mathematical Modeling and Omic Data Integration to Understand Dynamic Adaptation of Apicomplexan Parasites and Identify Pharmaceutical Targets|
P Sen, HJ Vial, O Radulescu
Comprehensive Analysis of Parasite Biology: From Metabolism to Drug …, 2016
|Metabolic alterations in immune cells associate with progression to type 1 diabetes|
P Sen, AM Dickens, MA López-Bascón, T Lindeman, E Kemppainen, ...
Diabetologia, 1-15, 2020
|Prenatal exposure to perfluoroalkyl substances modulates neonatal serum phospholipids, increasing risk of type 1 diabetes|
A McGlinchey, T Sinioja, S Lamichhane, P Sen, J Bodin, H Siljander, ...
Environment International 143, 105935, 2020
|Persistent alterations in plasma lipid profiles before introduction of gluten in the diet associated with progression to celiac disease|
P Sen, C Carlsson, SM Virtanen, S Simell, H Hyöty, J Ilonen, J Toppari, ...
Clinical and translational gastroenterology 10 (5), 2019
|Herring and chicken/pork meals lead to differences in plasma levels of TCA intermediates and arginine metabolites in overweight and obese men and women|
A Vincent, OI Savolainen, P Sen, NG Carlsson, A Almgren, H Lindqvist, ...
Molecular nutrition & food research 61 (3), 1600400, 2017
|Early-life exposure to perfluorinated alkyl substances modulates lipid metabolism in progression to celiac disease|
L Sinisalu, P Sen, S Salihovic, S Virtanen, H Hyoty, J Ilonen, J Toppari, ...
Environmental Research 188, 109864, 2020
|Systems biology approaches to study lipidomes in health and disease|
MA Alves, S Lamichhane, A Dickens, A McGlinchey, HC Ribeiro, P Sen, ...
Biochimica et Biophysica Acta (BBA)-Molecular and Cell Biology of Lipids, 158857, 2020
|Deep learning meets metabolomics: A methodological perspective|
P Sen, S Lamichhane, VB Mathema, A McGlinchey, AM Dickens, ...
Briefings in Bioinformatics, 2020
|Dysregulated lipid metabolism precedes onset of psychosis|
AM Dickens, P Sen, MJ Kempton, N Barrantes-Vidal, C Iyegbe, ...
Biological Psychiatry 89 (3), 288-297, 2020
|Association Between Circulating Lipids and Future Weight Gain in Individuals With an At-Risk Mental State and in First-Episode Psychosis|
S Lamichhane, AM Dickens, P Sen, H Laurikainen, F Borgan, J Suvisaari, ...
Schizophrenia Bulletin, 2020
|Metabolic profiling and compound-class identification reveal alterations in serum triglyceride levels in mice immunized with human vaccine adjuvant Alum|
S Khoomrung, I Nookaew, P Sen, TA Olafsdottir, J Persson, T Moritz, ...
Journal of Proteome Research 19 (1), 269-278, 2019