Manabu Torii
Manabu Torii
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Overview of BioCreative II gene mention recognition
L Smith, LK Tanabe, RJ nee Ando, CJ Kuo, IF Chung, CN Hsu, YS Lin, ...
Genome biology 9 (2), 1-19, 2008
BioC: a minimalist approach to interoperability for biomedical text processing
DC Comeau, R Islamaj Doğan, P Ciccarese, KB Cohen, M Krallinger, ...
Database 2013, 2013
The gene normalization task in BioCreative III
Z Lu, HY Kao, CH Wei, M Huang, J Liu, CJ Kuo, CN Hsu, RTH Tsai, ...
BMC bioinformatics 12 (8), 1-19, 2011
Using machine learning for concept extraction on clinical documents from multiple data sources
M Torii, K Wagholikar, H Liu
Journal of the American Medical Informatics Association 18 (5), 580-587, 2011
dbOGAP-an integrated bioinformatics resource for protein O-GlcNAcylation
J Wang, M Torii, H Liu, GW Hart, ZZ Hu
BMC bioinformatics 12 (1), 1-14, 2011
BioTagger-GM: a gene/protein name recognition system
M Torii, Z Hu, CH Wu, H Liu
Journal of the American Medical Informatics Association 16 (2), 247-255, 2009
An exploratory study of a text classification framework for Internet-based surveillance of emerging epidemics
M Torii, L Yin, T Nguyen, CT Mazumdar, H Liu, DM Hartley, NP Nelson
International journal of medical informatics 80 (1), 56-66, 2011
Feasibility of real-time satisfaction surveys through automated analysis of patients' unstructured comments and sentiments
F Alemi, M Torii, L Clementz, DC Aron
Quality Management in Healthcare 21 (1), 9-19, 2012
Stability of steepest descent with momentum for quadratic functions
M Torii, MT Hagan
IEEE Transactions on Neural Networks 13 (3), 752-756, 2002
System and method for detecting, collecting, analyzing, and communicating event-related information
PC Li, JR Collmann, JW Blake, MG Polyak, JM Wilson, JI Yoon, M Torii, ...
US Patent 9,529,974, 2016
Quantitative assessment of dictionary-based protein named entity tagging
H Liu, ZZ Hu, M Torii, C Wu, C Friedman
Journal of the American Medical Informatics Association 13 (5), 497-507, 2006
System and method for detecting, collecting, analyzing, and communicating emerging event-related information
M Torii, DM Hartley, NP Nelson
US Patent App. 13/883,515, 2013
iSimp: A sentence simplification system for biomedical text
Y Peng, CO Tudor, M Torii, CH Wu, K Vijay-Shanker
Proceedings of the 2012 IEEE International Conference on Bioinformatics and …, 2012
RLIMS-P 2.0: a generalizable rule-based information extraction system for literature mining of protein phosphorylation information
M Torii, CN Arighi, G Li, Q Wang, CH Wu, K Vijay-Shanker
IEEE/ACM Transactions on Computational Biology and Bioinformatics 12 (1), 17-29, 2014
A comparison study on algorithms of detecting long forms for short forms in biomedical text
M Torii, Z Hu, M Song, CH Wu, H Liu
BMC bioinformatics 8 (9), 1-9, 2007
An online literature mining tool for protein phosphorylation
X Yuan, ZZ Hu, HT Wu, M Torii, M Narayanaswamy, KE Ravikumar, ...
Bioinformatics 22 (13), 1668-1669, 2006
Risk factor detection for heart disease by applying text analytics in electronic medical records
M Torii, J Fan, W Yang, T Lee, MT Wiley, DS Zisook, Y Huang
Journal of biomedical informatics 58, S164-S170, 2015
Coreference analysis in clinical notes: a multi-pass sieve with alternate anaphora resolution modules
SR Jonnalagadda, D Li, S Sohn, STI Wu, K Wagholikar, M Torii, H Liu
Journal of the American Medical Informatics Association 19 (5), 867-874, 2012
A hybrid approach to sentiment sentence classification in suicide notes
S Sohn, M Torii, D Li, K Wagholikar, S Wu, H Liu
Biomedical informatics insights 5, BII. S8961, 2012
Document classification for mining host pathogen protein–protein interactions
L Yin, G Xu, M Torii, Z Niu, JM Maisog, C Wu, Z Hu, H Liu
Artificial intelligence in medicine 49 (3), 155-160, 2010
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