|BANNER: An executable survey of advances in biomedical named entity recognition|
R Leaman, G Gonzalez
Pacific Symposium on Biocomputing 13, 652-663, 2008
|DNorm: disease name normalization with pairwise learning to rank|
R Leaman, R Islamaj Doğan, Z Lu
Bioinformatics 29 (22), 2909-2917, 2013
|Overview of BioCreative II gene normalization|
AA Morgan, Z Lu, X Wang, AM Cohen, J Fluck, P Ruch, A Divoli, K Fundel, ...
Genome biology 9 (Suppl 2), S3, 2008
|NCBI disease corpus: a resource for disease name recognition and concept normalization|
RI Doğan, R Leaman, Z Lu
Journal of biomedical informatics 47, 1-10, 2014
|Towards internet-age pharmacovigilance: extracting adverse drug reactions from user posts in health-related social networks|
R Leaman, L Wojtulewicz, R Sullivan, A Skariah, J Yang, G Gonzalez
Proceedings of the 2010 workshop on biomedical natural language processing …, 2010
|Assessing the state of the art in biomedical relation extraction: overview of the BioCreative V chemical-disease relation (CDR) task|
CH Wei, Y Peng, R Leaman, AP Davis, CJ Mattingly, J Li, TC Wiegers, ...
Database 2016, 2016
|BioCreative V CDR task corpus: a resource for chemical disease relation extraction|
J Li, Y Sun, RJ Johnson, D Sciaky, CH Wei, R Leaman, AP Davis, ...
Database 2016, 2016
|tmChem: a high performance approach for chemical named entity recognition and normalization|
R Leaman, CH Wei, Z Lu
Journal of cheminformatics 7 (1), 1-10, 2015
|TaggerOne: joint named entity recognition and normalization with semi-Markov Models|
R Leaman, Z Lu
Bioinformatics 32 (18), 2839-2846, 2016
|The CHEMDNER corpus of chemicals and drugs and its annotation principles|
M Krallinger, O Rabal, F Leitner, M Vazquez, D Salgado, Z Lu, R Leaman, ...
Journal of cheminformatics 7 (1), 1-17, 2015
|The Protein-Protein Interaction tasks of BioCreative III: classification/ranking of articles and linking bio-ontology concepts to full text|
M Krallinger, M Vazquez, F Leitner, D Salgado, A Chatr-Aryamontri, ...
BMC bioinformatics 12 (8), 1-31, 2011
|Inter-species normalization of gene mentions with GNAT|
J Hakenberg, C Plake, R Leaman, M Schroeder, G Gonzalez
Bioinformatics 24 (16), i126-i132, 2008
|Challenges in clinical natural language processing for automated disorder normalization|
R Leaman, R Khare, Z Lu
Journal of biomedical informatics 57, 28-37, 2015
|PubTator central: automated concept annotation for biomedical full text articles|
CH Wei, A Allot, R Leaman, Z Lu
Nucleic acids research 47 (W1), W587-W593, 2019
|Enabling recognition of diseases in biomedical text with machine learning: corpus and benchmark|
R Leaman, C Miller, G Gonzalez
Proceedings of the 2009 Symposium on Languages in Biology and Medicine 82 (9), 2009
|Crowdsourcing in biomedicine: challenges and opportunities|
R Khare, BM Good, R Leaman, AI Su, Z Lu
Briefings in bioinformatics 17 (1), 23-32, 2016
|Annotating chemicals, diseases, and their interactions in biomedical literature|
J Li, Y Sun, R Johnson, D Sciaky, CH Wei, R Leaman, AP Davis, ...
Proceedings of the fifth BioCreative challenge evaluation workshop, 173-182, 2015
|Efficient extraction of protein-protein interactions from full-text articles|
J Hakenberg, R Leaman, NH Vo, S Jonnalagadda, R Sullivan, C Miller, ...
IEEE/ACM Transactions on Computational Biology and Bioinformatics 7 (3), 481-494, 2010
|Accessing biomedical literature in the current information landscape|
R Khare, R Leaman, Z Lu
Biomedical Literature Mining, 11-31, 2014
|A SNPshot of PubMed to associate genetic variants with drugs, diseases, and adverse reactions|
J Hakenberg, D Voronov, VH Nguyên, S Liang, S Anwar, B Lumpkin, ...
Journal of biomedical informatics 45 (5), 842-850, 2012