| Liquid droplet formation by HP1α suggests a role for phase separation in heterochromatin AG Larson, D Elnatan, MM Keenen, MJ Trnka, JB Johnston, ... Nature 547 (7662), 236-240, 2017 | 661 | 2017 |
| Structure of a complete mediator-RNA polymerase II pre-initiation complex PJ Robinson, MJ Trnka, DA Bushnell, RE Davis, PJ Mattei, AL Burlingame, ... Cell 166 (6), 1411-1422. e16, 2016 | 157 | 2016 |
| Matching cross-linked peptide spectra: only as good as the worse identification MJ Trnka, PR Baker, PJJ Robinson, AL Burlingame, RJ Chalkley Molecular & Cellular Proteomics 13 (2), 420-434, 2014 | 132 | 2014 |
| Molecular architecture of the yeast Mediator complex PJ Robinson, MJ Trnka, R Pellarin, CH Greenberg, DA Bushnell, R Davis, ... elife 4, e08719, 2015 | 116 | 2015 |
| Structure of the mediator head module bound to the carboxy-terminal domain of RNA polymerase II PJJ Robinson, DA Bushnell, MJ Trnka, AL Burlingame, RD Kornberg Proceedings of the National Academy of Sciences 109 (44), 17931-17935, 2012 | 98 | 2012 |
| HP1 reshapes nucleosome core to promote phase separation of heterochromatin S Sanulli, MJ Trnka, V Dharmarajan, RW Tibble, BD Pascal, ... Nature 575 (7782), 390-394, 2019 | 92 | 2019 |
| Topographic studies of the GroEL-GroES chaperonin complex by chemical cross-linking using diformyl ethynylbenzene: the power of high resolution electron transfer dissociation … MJ Trnka, AL Burlingame Molecular & Cellular Proteomics 9 (10), 2306-2317, 2010 | 53 | 2010 |
| The role of conformational flexibility on protein supercharging in native electrospray ionization HJ Sterling, CA Cassou, MJ Trnka, AL Burlingame, BA Krantz, ... Physical Chemistry Chemical Physics 13 (41), 18288-18296, 2011 | 48 | 2011 |
| Improved peak detection and deconvolution of native electrospray mass spectra from large protein complexes J Lu, MJ Trnka, SH Roh, PJJ Robinson, C Shiau, DG Fujimori, W Chiu, ... Journal of the American Society for Mass Spectrometry 26 (12), 2141-2151, 2015 | 42 | 2015 |
| Regulation of Rvb1/Rvb2 by a domain within the INO80 chromatin remodeling complex implicates the yeast Rvbs as protein assembly chaperones CY Zhou, CI Stoddard, JB Johnston, MJ Trnka, I Echeverria, E Palovcak, ... Cell reports 19 (10), 2033-2044, 2017 | 36 | 2017 |
| Ligand-induced conformational heterogeneity of cytochrome P450 CYP119 identified by 2D NMR spectroscopy with the unnatural amino acid 13C-p-methoxyphenylalanine JN Lampe, SN Floor, JD Gross, CR Nishida, Y Jiang, MJ Trnka, ... Journal of the American Chemical Society 130 (48), 16168-16169, 2008 | 32 | 2008 |
| First community-wide, comparative cross-linking mass spectrometry study C Iacobucci, C Piotrowski, R Aebersold, BC Amaral, P Andrews, K Bernfur, ... Analytical chemistry 91 (11), 6953-6961, 2019 | 31 | 2019 |
| Reconstitution of nucleosome demethylation and catalytic properties of a Jumonji histone demethylase C Shiau, MJ Trnka, A Bozicevic, IO Torres, B Al-Sady, AL Burlingame, ... Chemistry & biology 20 (4), 494-499, 2013 | 25 | 2013 |
| The nucleosomal acidic patch relieves auto-inhibition by the ISWI remodeler SNF2h N Gamarra, SL Johnson, MJ Trnka, AL Burlingame, GJ Narlikar Elife 7, e35322, 2018 | 22 | 2018 |
| A viral protein restricts Drosophila RNAi immunity by regulating Argonaute activity and stability A Nayak, DY Kim, MJ Trnka, CH Kerr, PV Lidsky, DJ Stanley, BM Rivera, ... Cell host & microbe 24 (4), 542-557. e9, 2018 | 19 | 2018 |
| Human Liver Cytochrome P450 3A4 Ubiquitination MOLECULAR RECOGNITION BY UBC7-gp78 AUTOCRINE MOTILITY FACTOR RECEPTOR AND UbcH5a-CHIP-Hsc70-Hsp40 E2-E3 UBIQUITIN LIGASE COMPLEXES YQ Wang, SM Kim, MJ Trnka, Y Liu, AL Burlingame, MA Correia Journal of Biological Chemistry 290 (6), 3308-3332, 2015 | 19 | 2015 |
| LEM2 phase separation promotes ESCRT-mediated nuclear envelope reformation A von Appen, D LaJoie, IE Johnson, MJ Trnka, SM Pick, AL Burlingame, ... Nature, 1-4, 2020 | 17 | 2020 |
| Histone H3 binding to the PHD1 domain of histone demethylase KDM5A enables active site remodeling JE Longbotham, CM Chio, V Dharmarajan, MJ Trnka, IO Torres, ... Nature communications 10 (1), 1-12, 2019 | 16 | 2019 |
| Chaperonin TRiC/CCT modulates the folding and activity of leukemogenic fusion oncoprotein AML1-ETO SH Roh, M Kasembeli, JG Galaz-Montoya, M Trnka, WCY Lau, ... Journal of Biological Chemistry 291 (9), 4732-4741, 2016 | 16 | 2016 |
| Deconvolution method for specific and nonspecific binding of ligand to multiprotein complex by native mass spectrometry S Guan, MJ Trnka, DA Bushnell, PJJ Robinson, JE Gestwicki, ... Analytical chemistry 87 (16), 8541-8546, 2015 | 15 | 2015 |
