Joao Xavier
Joao Xavier
Full Faculty Member, Computational and Systems Biology, Memorial Sloan Kettering Cancer Center
Verified email at - Homepage
Cited by
Cited by
Precision microbiome reconstitution restores bile acid mediated resistance to Clostridium difficile
CG Buffie, V Bucci, RR Stein, PT McKenney, L Ling, A Gobourne, D No, ...
Nature 517 (7533), 205-208, 2015
Intestinal Domination and the Risk of Bacteremia in Patients Undergoing Allogeneic Hematopoietic Stem Cell Transplantation
Y Taur, JB Xavier, L Lipuma, C Ubeda, J Goldberg, A Gobourne, YJ Lee, ...
Clinical Infectious Diseases 55 (7), 905-914, 2012
The sociobiology of biofilms
CD Nadell, JB Xavier, KR Foster
FEMS microbiology reviews 33 (1), 206-224, 2009
Cooperation and conflict in microbial biofilms
JB Xavier, KR Foster
Proceedings of the National Academy of Sciences 104 (3), 876, 2007
Profound alterations of intestinal microbiota following a single dose of Clindamycin results in sustained susceptibility to C. difficile-induced colitis.
CG Buffie, I Jarchum, M Equinda, L Lipuma, A Gobourne, A Viale, ...
Infection and Immunity, IAI. 05496-11v1, 2011
Ecological modeling from time-series inference: insight into dynamics and stability of intestinal microbiota
RR Stein, V Bucci, NC Toussaint, CG Buffie, G Rätsch, EG Pamer, ...
PLoS computational biology 9 (12), e1003388, 2013
The evolution of quorum sensing in bacterial biofilms
CD Nadell, JB Xavier, SA Levin, KR Foster
PLoS biology 6 (1), e14, 2008
Animal behavior and the microbiome
VO Ezenwa, NM Gerardo, DW Inouye, M Medina, JB Xavier
Science 338 (6104), 198-199, 2012
Intestinal microbiota containing Barnesiella species cures vancomycin-resistant Enterococcus faecium colonization
C Ubeda, V Bucci, S Caballero, A Djukovic, NC Toussaint, M Equinda, ...
Infection and immunity 81 (3), 965-973, 2013
Emergence of spatial structure in cell groups and the evolution of cooperation
CD Nadell, KR Foster, JB Xavier
PLoS computational biology 6 (3), e1000716, 2010
Biofilm-control strategies based on enzymic disruption of the extracellular polymeric substance matrix–a modelling study
JB Xavier, C Picioreanu, SA Rani, M Van Loosdrecht, PS Stewart
Microbiology 151 (12), 3817, 2005
A molecular mechanism that stabilizes cooperative secretions in Pseudomonas aeruginosa
JB Xavier, W Kim, KR Foster
Molecular microbiology, 2011
Turning ecology and evolution against cancer
KS Korolev, JB Xavier, J Gore
Nature Reviews Cancer 14 (5), 371-380, 2014
A framework for multidimensional modelling of activity and structure of multispecies biofilms
JB Xavier, C Picioreanu, M Van Loosdrecht
Environmental microbiology 7 (8), 1085-1103, 2005
Kinetic model of a granular sludge SBR: influences on nutrient removal
MK De Kreuk, C Picioreanu, M Hosseini, JB Xavier, MCM Van Loosdrecht
Biotechnology and bioengineering 97 (4), 801-815, 2007
Biofilm formation as a response to ecological competition
NM Oliveira, E Martinez-Garcia, J Xavier, WM Durham, R Kolter, W Kim, ...
PLoS biology 13 (7), e1002191, 2015
Social evolution in multispecies biofilms
S Mitri, JB Xavier, KR Foster
Proceedings of the National Academy of Sciences 108 (Supplement 2), 10839, 2011
A general description of detachment for multidimensional modelling of biofilms
JB Xavier, C Picioreanu, M Van Loosdrecht
Biotechnology and bioengineering 91 (6), 651-669, 2005
Reconstitution of the gut microbiota of antibiotic-treated patients by autologous fecal microbiota transplant
Y Taur, K Coyte, J Schluter, E Robilotti, C Figueroa, M Gjonbalaj, ...
Science translational medicine 10 (460), 2018
Multi-scale individual-based model of microbial and bioconversion dynamics in aerobic granular sludge
JB Xavier, MK De Kreuk, C Picioreanu, MCM Van Loosdrecht
Environmental science & technology 41 (18), 6410-6417, 2007
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