Accurate prediction of protein structures and interactions using a three-track neural network M Baek, F DiMaio, I Anishchenko, J Dauparas, S Ovchinnikov, GR Lee, ... Science 373 (6557), 871-876, 2021 | 3457 | 2021 |
Prediction of protein structure and interaction by GALAXY protein modeling programs WH Shin, GR Lee, L Heo, H Lee, C Seok Bio Design 2 (1), 1-11, 2014 | 194 | 2014 |
De novo design of luciferases using deep learning AHW Yeh, C Norn, Y Kipnis, D Tischer, SJ Pellock, D Evans, P Ma, ... Nature 614 (7949), 774-780, 2023 | 166 | 2023 |
Prediction of homoprotein and heteroprotein complexes by protein docking and template‐based modeling: a CASP‐CAPRI experiment MF Lensink, S Velankar, A Kryshtafovych, SY Huang, ... Proteins: Structure, Function, and Bioinformatics 84, 323-348, 2016 | 166 | 2016 |
Effective protein model structure refinement by loop modeling and overall relaxation GR Lee, L Heo, C Seok Proteins: Structure, Function, and Bioinformatics 84, 293-301, 2016 | 105 | 2016 |
GalaxyRefine2: simultaneous refinement of inaccurate local regions and overall protein structure GR Lee, J Won, L Heo, C Seok Nucleic acids research 47 (W1), W451-W455, 2019 | 93 | 2019 |
Protein loop modeling using a new hybrid energy function and its application to modeling in inaccurate structural environments H Park, GR Lee, L Heo, C Seok PloS one 9 (11), e113811, 2014 | 92 | 2014 |
Generalized biomolecular modeling and design with RoseTTAFold All-Atom R Krishna, J Wang, W Ahern, P Sturmfels, P Venkatesh, I Kalvet, GR Lee, ... Science 384 (6693), eadl2528, 2024 | 49 | 2024 |
Galaxy7TM: flexible GPCR–ligand docking by structure refinement GR Lee, C Seok Nucleic acids research 44 (W1), W502-W506, 2016 | 47 | 2016 |
High‐accuracy refinement using Rosetta in CASP13 H Park, GR Lee, DE Kim, I Anishchenko, Q Cong, D Baker Proteins: Structure, Function, and Bioinformatics 87 (12), 1276-1282, 2019 | 41 | 2019 |
Biophysical and functional characterization of Norrin signaling through Frizzled4 I Bang, HR Kim, AH Beaven, J Kim, SB Ko, GR Lee, W Kan, H Lee, W Im, ... Proceedings of the National Academy of Sciences 115 (35), 8787-8792, 2018 | 39 | 2018 |
Accurate protein structure prediction: what comes next C Seok, M Baek, M Steinegger, H Park, GR Lee, J Won Biodesign 9 (3), 47-50, 2021 | 31 | 2021 |
An analysis and evaluation of the WeFold collaborative for protein structure prediction and its pipelines in CASP11 and CASP12 C Keasar, LJ McGuffin, B Wallner, G Chopra, B Adhikari, D Bhattacharya, ... Scientific reports 8 (1), 9939, 2018 | 23 | 2018 |
Evaluating GPCR modeling and docking strategies in the era of deep learning-based protein structure prediction S Lee, S Kim, GR Lee, S Kwon, H Woo, C Seok, H Park Computational and Structural Biotechnology Journal 21, 158-167, 2023 | 18 | 2023 |
Simultaneous refinement of inaccurate local regions and overall structure in the CASP12 protein model refinement experiment GR Lee, L Heo, C Seok Proteins: Structure, Function, and Bioinformatics 86, 168-176, 2018 | 18 | 2018 |
Benchmarking predictions of allostery in liver pyruvate kinase in CAGI4 Q Xu, Q Tang, P Katsonis, O Lichtarge, D Jones, S Bovo, G Babbi, ... Human mutation 38 (9), 1123-1131, 2017 | 18 | 2017 |
De novo design of high-affinity protein binders to bioactive helical peptides SV Torres, PJY Leung, ID Lutz, P Venkatesh, JL Watson, F Hink, ... Biorxiv, 2022.12. 10.519862, 2022 | 17 | 2022 |
Conformational sampling of flexible ligand-binding protein loops GR Lee, WH Shin, HB Park, SM Shin, CO Seok Bulletin of the Korean Chemical Society 33 (3), 770-774, 2012 | 17 | 2012 |
Evaluation of galaxydock based on the community structure–activity resource 2013 and 2014 benchmark studies WH Shin, GR Lee, C Seok Journal of Chemical Information and Modeling 56 (6), 988-995, 2016 | 16 | 2016 |
Template‐based modeling and ab initio refinement of protein oligomer structures using GALAXY in CAPRI round 30 H Lee, M Baek, GR Lee, S Park, C Seok Proteins: Structure, Function, and Bioinformatics 85 (3), 399-407, 2017 | 15 | 2017 |