Philipp Rescheneder
Philipp Rescheneder
Center for Integrative Bioinformatics Vienna, University of Vienna, Medical University of Vienna
Verifierad e-postadress på univie.ac.at - Startsida
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Accurate detection of complex structural variations using single-molecule sequencing
FJ Sedlazeck, P Rescheneder, M Smolka, H Fang, M Nattestad, ...
Nature methods 15 (6), 461-468, 2018
3392018
NextGenMap: fast and accurate read mapping in highly polymorphic genomes
FJ Sedlazeck, P Rescheneder, A Von Haeseler
Bioinformatics 29 (21), 2790-2791, 2013
2302013
Thiol-linked alkylation of RNA to assess expression dynamics
VA Herzog, B Reichholf, T Neumann, P Rescheneder, P Bhat, TR Burkard, ...
Nature methods 14 (12), 1198-1204, 2017
1132017
A-type lamins bind both hetero-and euchromatin, the latter being regulated by lamina-associated polypeptide 2 alpha
K Gesson, P Rescheneder, MP Skoruppa, A von Haeseler, T Dechat, ...
Genome research 26 (4), 462-473, 2016
902016
SLAM-seq defines direct gene-regulatory functions of the BRD4-MYC axis
M Muhar, A Ebert, T Neumann, C Umkehrer, J Jude, C Wieshofer, ...
Science 360 (6390), 800-805, 2018
852018
Revisiting the coding potential of the E. coli genome through Hfq co-immunoprecipitation
I Bilusic, N Popitsch, P Rescheneder, R Schroeder, M Lybecker
RNA biology 11 (5), 641-654, 2014
652014
The Borrelia burgdorferi RelA/SpoT homolog and stringent response regulate survival in the tick vector and global gene expression during starvation
D Drecktrah, M Lybecker, N Popitsch, P Rescheneder, LS Hall, ...
PLoS Pathog 11 (9), e1005160, 2015
552015
Complex rearrangements and oncogene amplifications revealed by long-read DNA and RNA sequencing of a breast cancer cell line
M Nattestad, S Goodwin, K Ng, T Baslan, FJ Sedlazeck, P Rescheneder, ...
Genome research 28 (8), 1126-1135, 2018
472018
Natural RNA Polymerase Aptamers Regulate Transcription in E. coli
N Sedlyarova, P Rescheneder, A Magán, N Popitsch, N Rziha, I Bilusic, ...
Molecular cell 67 (1), 30-43. e6, 2017
232017
Temperature-dependent sRNA transcriptome of the Lyme disease spirochete
N Popitsch, I Bilusic, P Rescheneder, R Schroeder, M Lybecker
BMC genomics 18 (1), 28, 2017
222017
Teaser: Individualized benchmarking and optimization of read mapping results for NGS data
M Smolka, P Rescheneder, MC Schatz, A Von Haeseler, FJ Sedlazeck
Genome biology 16 (1), 1-10, 2015
222015
Quantification of experimentally induced nucleotide conversions in high-throughput sequencing datasets
T Neumann, VA Herzog, M Muhar, A von Haeseler, J Zuber, SL Ameres, ...
BMC bioinformatics 20 (1), 258, 2019
132019
The stringent response-regulated sRNA transcriptome of Borrelia burgdorferi
D Drecktrah, LS Hall, P Rescheneder, M Lybecker, DS Samuels
Frontiers in cellular and infection microbiology 8, 231, 2018
82018
Accurate detection of complex structural variations using single molecule sequencing. bioRxiv. 2017
FJ Sedlazeck, P Rescheneder, M Smolka, H Fang, M Nattestad, ...
72017
MASon: Million Alignments in Seconds-A Platform Independent Pairwise Sequence Alignment Library for next Generation Sequencing Data
P Rescheneder, A von Haeseler, FJ Sedlazeck
International Conference on Bioinformatics Models, Methods and Algorithms 2 …, 2012
32012
Thiol-linked alkylation for the metabolic sequencing of RNA
VA Herzog, B Reichholf, T Neumann, P Rescheneder, P Bhat, TR Burkard, ...
bioRxiv, 177642, 2017
22017
DetectionofStructuralVariants usingthirdgenerationsequencing
FJ Sedlazeck, P Rescheneder, M Nattestad, MC Schatz
22015
Correction: The Borrelia burgdorferi RelA/SpoT homolog and stringent response regulate survival in the tick vector and global gene expression during starvation
D Drecktrah, M Lybecker, N Popitsch, P Rescheneder, LS Hall, ...
PLoS Pathog 11 (10), e1005242, 2015
12015
Comprehensive genome and transcriptome structural analysis of a breast cancer cell line using single molecule sequencing
M Nattestad, K Ng, S Goodwin, T Baslan, F Sedlazeck, J Gurtowski, ...
Cancer Research 76 (14 Supplement), 850-850, 2016
2016
Genome-wide identification of RNAP-binding RNA elements regulating transcription inE. coli: CS III-5-4
N Sedlyarova, N Rziha, M Lybecker, N Popitsch, P Rescheneder, ...
The Febs Journal 281, 2014
2014
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Artiklar 1–20