Philipp Rescheneder
Philipp Rescheneder
Center for Integrative Bioinformatics Vienna, University of Vienna, Medical University of Vienna
Verifierad e-postadress på univie.ac.at - Startsida
TitelCiteras avÅr
NextGenMap: fast and accurate read mapping in highly polymorphic genomes
FJ Sedlazeck, P Rescheneder, A Von Haeseler
Bioinformatics 29 (21), 2790-2791, 2013
1882013
Accurate detection of complex structural variations using single-molecule sequencing
FJ Sedlazeck, P Rescheneder, M Smolka, H Fang, M Nattestad, ...
Nature methods 15 (6), 461, 2018
1802018
A-type lamins bind both hetero-and euchromatin, the latter being regulated by lamina-associated polypeptide 2 alpha
K Gesson, P Rescheneder, MP Skoruppa, A von Haeseler, T Dechat, ...
Genome research 26 (4), 462-473, 2016
692016
Thiol-linked alkylation of RNA to assess expression dynamics
VA Herzog, B Reichholf, T Neumann, P Rescheneder, P Bhat, TR Burkard, ...
Nature methods 14 (12), 1198, 2017
652017
Revisiting the coding potential of the E. coli genome through Hfq co-immunoprecipitation
I Bilusic, N Popitsch, P Rescheneder, R Schroeder, M Lybecker
RNA biology 11 (5), 641-654, 2014
592014
SLAM-seq defines direct gene-regulatory functions of the BRD4-MYC axis
M Muhar, A Ebert, T Neumann, C Umkehrer, J Jude, C Wieshofer, ...
Science 360 (6390), 800-805, 2018
512018
The Borrelia burgdorferi RelA/SpoT homolog and stringent response regulate survival in the tick vector and global gene expression during starvation
D Drecktrah, M Lybecker, N Popitsch, P Rescheneder, LS Hall, ...
PLoS pathogens 11 (9), e1005160, 2015
462015
Complex rearrangements and oncogene amplifications revealed by long-read DNA and RNA sequencing of a breast cancer cell line
M Nattestad, S Goodwin, K Ng, T Baslan, FJ Sedlazeck, P Rescheneder, ...
Genome research 28 (8), 1126-1135, 2018
312018
Teaser: Individualized benchmarking and optimization of read mapping results for NGS data
M Smolka, P Rescheneder, MC Schatz, A Von Haeseler, FJ Sedlazeck
Genome biology 16 (1), 235, 2015
212015
Natural RNA Polymerase Aptamers Regulate Transcription in E. coli
N Sedlyarova, P Rescheneder, A Magán, N Popitsch, N Rziha, I Bilusic, ...
Molecular cell 67 (1), 30-43. e6, 2017
192017
Temperature-dependent sRNA transcriptome of the Lyme disease spirochete
N Popitsch, I Bilusic, P Rescheneder, R Schroeder, M Lybecker
BMC genomics 18 (1), 28, 2017
172017
Quantification of experimentally induced nucleotide conversions in high-throughput sequencing datasets
T Neumann, VA Herzog, M Muhar, A von Haeseler, J Zuber, SL Ameres, ...
BMC bioinformatics 20 (1), 258, 2019
52019
Accurate detection of complex structural variations using single molecule sequencing. bioRxiv. 2017
FJ Sedlazeck, P Rescheneder, M Smolka, H Fang, M Nattestad, ...
42017
The stringent response-regulated sRNA transcriptome of Borrelia burgdorferi
D Drecktrah, LS Hall, P Rescheneder, M Lybecker, DS Samuels
Frontiers in cellular and infection microbiology 8, 231, 2018
32018
MASon: Million Alignments In Seconds-A Platform Independent Pairwise Sequence Alignment Library for Next Generation Sequencing Data.
P Rescheneder, F Sedlazeck, A von Haeseler
SciTePress, 2012
32012
Correction: The Borrelia burgdorferi RelA/SpoT homolog and stringent response regulate survival in the tick vector and global gene expression during starvation
D Drecktrah, M Lybecker, N Popitsch, P Rescheneder, LS Hall, ...
PLoS pathogens 11 (10), e1005242, 2015
12015
Thiol-linked alkylation for the metabolic sequencing of RNA
VA Herzog, B Reichholf, T Neumann, P Rescheneder, P Bhat, TR Burkard, ...
bioRxiv, 177642, 2017
2017
Comprehensive genome and transcriptome structural analysis of a breast cancer cell line using single molecule sequencing
M Nattestad, K Ng, S Goodwin, T Baslan, F Sedlazeck, J Gurtowski, ...
Cancer Research 76 (14 Supplement), 850-850, 2016
2016
Genome-wide identification of RNAP-binding RNA elements regulating transcription inE. coli
N Sedlyarova, N Rziha, M Lybecker, N Popitsch, P Rescheneder, ...
The Febs Journal 281, 2014
2014
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Artiklar 1–19