Juan Nunez-Iglesias
Juan Nunez-Iglesias
Research Fellow, Monash Micro Imaging, Monash University
Verified email at monash.edu - Homepage
Title
Cited by
Cited by
Year
scikit-image: image processing in Python
S Van der Walt, JL Schönberger, J Nunez-Iglesias, F Boulogne, ...
PeerJ 2, e453, 2014
13352014
SciPy 1.0: fundamental algorithms for scientific computing in Python
P Virtanen, R Gommers, TE Oliphant, M Haberland, T Reddy, ...
Nature methods 17 (3), 261-272, 2020
3892020
Joint genome-wide profiling of miRNA and mRNA expression in Alzheimer's disease cortex reveals altered miRNA regulation
J Nunez-Iglesias, CC Liu, TE Morgan, CE Finch, XJ Zhou
PloS one 5 (2), 2010
2992010
Functional annotation and network reconstruction through cross-platform integration of microarray data
XJ Zhou, MCJ Kao, H Huang, A Wong, J Nunez-Iglesias, M Primig, ...
Nature biotechnology 23 (2), 238-243, 2005
1742005
Synaptic circuits and their variations within different columns in the visual system of Drosophila
S Takemura, CS Xu, Z Lu, PK Rivlin, T Parag, DJ Olbris, S Plaza, T Zhao, ...
Proceedings of the National Academy of Sciences 112 (44), 13711-13716, 2015
1282015
Machine learning of hierarchical clustering to segment 2D and 3D images
J Nunez-Iglesias, TP Ryan Kennedy, J Shi, DB Chklovskii
PloS one 8 (8), 2013
1152013
An integrative approach to characterize disease-specific pathways and their coordination: a case study in cancer
M Xu, MCJ Kao, J Nunez-Iglesias, JR Nevins, M West, XJ Zhou
BMC genomics 9 (1), S12, 2008
602008
Gene Aging Nexus: a web database and data mining platform for microarray data on aging
F Pan, CH Chiu, S Pulapura, MR Mehan, J Nunez-Iglesias, K Zhang, ...
Nucleic acids research 35 (suppl_1), D756-D759, 2007
492007
Graph-based active learning of agglomeration (GALA): a Python library to segment 2D and 3D neuroimages
J Nunez-Iglesias, R Kennedy, SM Plaza, A Chakraborty, WT Katz
Frontiers in neuroinformatics 8, 34, 2014
452014
Recruitment of the adaptor protein 2 complex by the human immunodeficiency virus type 2 envelope protein is necessary for high levels of virus release
B Noble, P Abada, J Nunez-Iglesias, PM Cannon
Journal of virology 80 (6), 2924-2932, 2006
372006
An integrative modular approach to systematically predict gene-phenotype associations
MR Mehan, J Nunez-Iglesias, C Dai, MS Waterman, XJ Zhou
BMC bioinformatics 11 (S1), S62, 2010
212010
Integrative Array Analyzer: a software package for analysis of cross-platform and cross-species microarray data
F Pan, K Kamath, K Zhang, S Pulapura, A Achar, J Nunez-Iglesias, ...
Bioinformatics 22 (13), 1665-1667, 2006
212006
Electron microscopy reconstruction of brain structure using sparse representations over learned dictionaries
T Hu, J Nunez-Iglesias, S Vitaladevuni, L Scheffer, S Xu, M Bolorizadeh, ...
IEEE transactions on medical imaging 32 (12), 2179-2188, 2013
18*2013
Synaptic Cleft Segmentation in Non-isotropic Volume Electron Microscopy of the Complete Drosophila Brain
L Heinrich, J Funke, C Pape, J Nunez-Iglesias, S Saalfeld
International Conference on Medical Image Computing and Computer-Assisted …, 2018
172018
An integrative network approach to map the transcriptome to the phenome
MR Mehan, J Nunez-Iglesias, M Kalakrishnan, MS Waterman, XJ Zhou
Journal of Computational Biology 16 (8), 1023-1034, 2009
172009
Analyzing microtomography data with Python and the scikit-image library
E Gouillart, J Nunez-Iglesias, S Van Der Walt
Advanced structural and chemical imaging 2 (1), 1-11, 2016
162016
Pattern mining across many massive biological networks
W Li, H Hu, Y Huang, H Li, MR Mehan, J Nunez-Iglesias, M Xu, X Yan, ...
Functional Coherence of Molecular Networks in Bioinformatics, 137-170, 2012
92012
High resolution segmentation of neuronal tissues from low depth-resolution EM imagery
D Glasner, T Hu, J Nunez-Iglesias, L Scheffer, S Xu, H Hess, R Fetter, ...
International Workshop on Energy Minimization Methods in Computer Vision and …, 2011
82011
Frequent pattern discovery in multiple biological networks: Patterns and algorithms
W Li, H Hu, Y Huang, H Li, MR Mehan, J Nunez-Iglesias, M Xu, X Yan, ...
Statistics in Biosciences 4 (1), 157-176, 2012
72012
The knob protein KAHRP assembles into a ring-shaped structure that underpins virulence complex assembly
O Looker, AJ Blanch, B Liu, J Nunez-Iglesias, PJ McMillan, L Tilley, ...
PLoS pathogens 15 (5), e1007761, 2019
62019
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Articles 1–20