Landscape of somatic mutations in 560 breast cancer whole-genome sequences S Nik-Zainal, H Davies, J Staaf, M Ramakrishna, D Glodzik, X Zou, ... Nature 534 (7605), 47-54, 2016 | 2320 | 2016 |
The Sweden Cancerome Analysis Network-Breast (SCAN-B) Initiative: a large-scale multicenter infrastructure towards implementation of breast cancer genomic analyses in the … LH Saal, J Vallon-Christersson, J Häkkinen, C Hegardt, D Grabau, ... Genome medicine 7, 1-12, 2015 | 198 | 2015 |
Molecular profiling reveals low-and high-grade forms of primary melanoma K Harbst, J Staaf, M Lauss, A Karlsson, A Måsbäck, I Johansson, ... Clinical cancer research 18 (15), 4026-4036, 2012 | 120 | 2012 |
Genome-wide DNA methylation analysis of lung carcinoma reveals one neuroendocrine and four adenocarcinoma epitypes associated with patient outcome A Karlsson, M Jönsson, M Lauss, H Brunnström, P Jönsson, Å Borg, ... Clinical Cancer Research 20 (23), 6127-6140, 2014 | 105 | 2014 |
Prognostic impact of array-based genomic profiles in esophageal squamous cell cancer A Carneiro, A Isinger, A Karlsson, J Johansson, G Jönsson, PO Bendahl, ... BMC cancer 8, 1-9, 2008 | 104 | 2008 |
Comprehensive molecular comparison of BRCA1 hypermethylated and BRCA1 mutated triple negative breast cancers D Glodzik, A Bosch, J Hartman, M Aine, J Vallon-Christersson, ... Nature communications 11 (1), 3747, 2020 | 80 | 2020 |
Mutational and gene fusion analyses of primary large cell and large cell neuroendocrine lung cancer A Karlsson, H Brunnström, KE Lindquist, K Jirström, M Jönsson, ... Oncotarget 6 (26), 22028, 2015 | 72 | 2015 |
Proteogenomics of non-small cell lung cancer reveals molecular subtypes associated with specific therapeutic targets and immune-evasion mechanisms J Lehtiö, T Arslan, I Siavelis, Y Pan, F Socciarelli, O Berkovska, HM Umer, ... Nature cancer 2 (11), 1224-1242, 2021 | 70 | 2021 |
Gene expression profiling of large cell lung cancer links transcriptional phenotypes to the new histological WHO 2015 classification A Karlsson, H Brunnström, P Micke, S Veerla, J Mattsson, L La Fleur, ... Journal of Thoracic Oncology 12 (8), 1257-1267, 2017 | 58 | 2017 |
Clinical framework for next generation sequencing based analysis of treatment predictive mutations and multiplexed gene fusion detection in non-small cell lung cancer KE Lindquist, A Karlsson, P Levéen, H Brunnström, C Reuterswärd, ... Oncotarget 8 (21), 34796, 2017 | 56 | 2017 |
Relation between smoking history and gene expression profiles in lung adenocarcinomas J Staaf, G Jönsson, M Jönsson, A Karlsson, S Isaksson, A Salomonsson, ... BMC medical genomics 5, 1-12, 2012 | 56 | 2012 |
Landscape of somatic allelic imbalances and copy number alterations in human lung carcinoma J Staaf, S Isaksson, A Karlsson, M Jönsson, L Johansson, P Jönsson, ... International journal of cancer 132 (9), 2020-2031, 2013 | 45 | 2013 |
DNA methylation subgroups in melanoma are associated with proliferative and immunological processes M Lauss, M Ringnér, A Karlsson, K Harbst, C Busch, J Geisler, ... BMC Medical Genomics 8, 1-11, 2015 | 40 | 2015 |
A multi‐omic study reveals BTG2 as a reliable prognostic marker for early‐stage non‐small cell lung cancer S Shen, R Zhang, Y Guo, E Loehrer, Y Wei, Y Zhu, Q Yuan, S Moran, ... Molecular oncology 12 (6), 913-924, 2018 | 37 | 2018 |
EGLN2 DNA methylation and expression interact with HIF1A to affect survival of early-stage NSCLC R Zhang, L Lai, J He, C Chen, D You, W Duan, X Dong, Y Zhu, L Lin, ... Epigenetics 14 (2), 118-129, 2019 | 34 | 2019 |
Genomic and transcriptional alterations in lung adenocarcinoma in relation to smoking history A Karlsson, M Ringnér, M Lauss, J Botling, P Micke, M Planck, J Staaf Clinical Cancer Research 20 (18), 4912-4924, 2014 | 34 | 2014 |
Independent validation of early-stage non-small cell lung cancer prognostic scores incorporating epigenetic and transcriptional biomarkers with gene-gene interactions and main … R Zhang, C Chen, X Dong, S Shen, L Lai, J He, D You, L Lin, Y Zhu, ... Chest 158 (2), 808-819, 2020 | 33 | 2020 |
Histological specificity of alterations and expression of KIT and KITLG in non‐small cell lung carcinoma A Salomonsson, M Jönsson, S Isaksson, A Karlsson, P Jönsson, A Gaber, ... Genes, Chromosomes and Cancer 52 (11), 1088-1096, 2013 | 23 | 2013 |
SIPA1L3 methylation modifies the benefit of smoking cessation on lung adenocarcinoma survival: an epigenomic–smoking interaction analysis R Zhang, L Lai, X Dong, J He, D You, C Chen, L Lin, Y Zhu, H Huang, ... Molecular oncology 13 (5), 1235-1248, 2019 | 22 | 2019 |
A combined gene expression tool for parallel histological prediction and gene fusion detection in non-small cell lung cancer A Karlsson, H Cirenajwis, K Ericson-Lindquist, H Brunnström, ... Scientific Reports 9 (1), 5207, 2019 | 22 | 2019 |