| Annotating the human genome with Disease Ontology JD Osborne, J Flatow, M Holko, SM Lin, WA Kibbe, L Zhu, MI Danila, ... BMC genomics 10, 1-8, 2009 | 294 | 2009 |
| Genome sequence diversity and clues to the evolution of variola (smallpox) virus JJ Esposito, SA Sammons, AM Frace, JD Osborne, M Olsen-Rasmussen, ... Science 313 (5788), 807-812, 2006 | 239 | 2006 |
| Type 1 and Type 2 Strains of Mycoplasma pneumoniae Form Different Biofilms WL Simmons, JM Daubenspeck, JD Osborne, MF Balish, KB Waites, ... Microbiology, 2013 | 88 | 2013 |
| Poxvirus orthologous clusters (POCs) A Ehlers, J Osborne, S Slack, RL Roper, C Upton Bioinformatics 18 (11), 1544-1545, 2002 | 75 | 2002 |
| Comparative genome analysis of Mycoplasma pneumoniae L Xiao, T Ptacek, JD Osborne, DM Crabb, WL Simmons, EJ Lefkowitz, ... BMC genomics 16, 1-16, 2015 | 74 | 2015 |
| Efficient identification of nationally mandated reportable cancer cases using natural language processing and machine learning JD Osborne, M Wyatt, AO Westfall, J Willig, S Bethard, G Gordon Journal of the American Medical Informatics Association 23 (6), 1077-1084, 2016 | 66 | 2016 |
| Genomic differences of Vaccinia virus clones from Dryvax smallpox vaccine: the Dryvax-like ACAM2000 and the mouse neurovirulent Clone-3 JD Osborne, M Da Silva, AM Frace, SA Sammons, M Olsen-Rasmussen, ... Vaccine 25 (52), 8807-8832, 2007 | 56 | 2007 |
| Biolink Model: A universal schema for knowledge graphs in clinical, biomedical, and translational science DR Unni, SAT Moxon, M Bada, M Brush, R Bruskiewich, JH Caufield, ... Clinical and translational science 15 (8), 1848-1855, 2022 | 45 | 2022 |
| Genomic sequence and analysis of a vaccinia virus isolate from a patient with a smallpox vaccine-related complication G Li, N Chen, Z Feng, RML Buller, J Osborne, T Harms, I Damon, C Upton, ... Virology Journal 3, 1-9, 2006 | 31 | 2006 |
| Mining biomedical data using MetaMap transfer (MMtx) and the unified medical language system (UMLS) JD Osborne, S Lin, LJ Zhu, WA Kibbe Gene Function Analysis, 153-169, 2007 | 30 | 2007 |
| Interpreting microarray results with gene ontology and MeSH JD Osborne, L Zhu, SM Lin, WA Kibbe Microarray Data Analysis: Methods and Applications, 223-241, 2007 | 30 | 2007 |
| GeneChip resequencing of the smallpox virus genome can identify novel strains: a biodefense application IM Sulaiman, K Tang, J Osborne, S Sammons, RM Wohlhueter Journal of Clinical Microbiology 45 (2), 358-363, 2007 | 26 | 2007 |
| Reduction of hydrogen peroxide accumulation and toxicity by a catalase from Mycoplasma iowae RE Pritchard, AJ Prassinos, JD Osborne, Z Raviv, MF Balish PLoS One 9 (8), e105188, 2014 | 25 | 2014 |
| Evaluation of YTEX and MetaMap for clinical concept recognition JD Osborne, B Gyawali, T Solorio arXiv preprint arXiv:1402.1668, 2014 | 25 | 2014 |
| Progress toward a universal biomedical data translator K Fecho, AE Thessen, SE Baranzini, C Bizon, JJ Hadlock, S Huang, ... Clinical and Translational Science 15 (8), 1838-1847, 2022 | 19 | 2022 |
| GeneRIF is a more comprehensive, current and computationally tractable source of gene-disease relationships than OMIM JD Osborne, S Lin, WA Kibbe, L Zhu, MI Danila, RL Chisholm Bioinformatics Core, Northwestern University Technical Report, 2007 | 19 | 2007 |
| Draft Genome Sequence of Hymenobacter sp. Strain IS2118, Isolated from a Freshwater Lake in Schirmacher Oasis, Antarctica, Reveals Diverse Genes for … H Koo, T Ptacek, M Crowley, AK Swain, JD Osborne, AK Bej, ... Genome announcements 2 (4), 10.1128/genomea. 00739-14, 2014 | 17 | 2014 |
| The precision medicine process for treating rare disease using the artificial intelligence tool mediKanren A Foksinska, CM Crowder, AB Crouse, J Henrikson, WE Byrd, ... Frontiers in Artificial Intelligence 5, 205, 2022 | 13 | 2022 |
| Other riffs on cooperation are already showing how well a wiki could work JD Osborne, S Lin, WA Kibbe Nature 446 (7138), 856-856, 2007 | 10 | 2007 |
| CUILESS2016: a clinical corpus applying compositional normalization of text mentions JD Osborne, MB Neu, MI Danila, T Solorio, SJ Bethard Journal of biomedical semantics 9, 1-9, 2018 | 9 | 2018 |
Maria Ioana DanilaAssociate Professor of Medicine, University of Alabama at BirminghamVerified email at uab.edu
