Nathan Clement
Nathan Clement
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Pathoscope: Species identification and strain attribution with unassembled sequencing data
OE Francis, M Bendall, S Manimaran, C Hong, NL Clement, ...
Genome research 23 (10), 1721-1729, 2013
The GNUMAP algorithm: unbiased probabilistic mapping of oligonucleotides from next-generation sequencing
NL Clement, Q Snell, MJ Clement, PC Hollenhorst, J Purwar, BJ Graves, ...
Bioinformatics 26 (1), 38-45, 2010
Probabilistic alignment leads to improved accuracy and read coverage for bisulfite sequencing data
C Hong, NL Clement, S Clement, SS Hammoud, DT Carrell, BR Cairns, ...
BMC bioinformatics 14 (1), 337, 2013
Parallel mapping approaches for GNUMAP
NL Clement, MJ Clement, Q Snell, WE Johnson
2011 IEEE International Symposium on Parallel and Distributed Processing …, 2011
Statistical framework for uncertainty quantification in computational molecular modeling
M Rasheed, N Clement, A Bhowmick, CL Bajaj
IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB) 16 …, 2019
Quantifying and Visualizing Uncertainties in Molecular Models
M Rasheed, N Clement, A Bhowmick, C Bajaj
arXiv preprint arXiv:1508.03882, 2015
Viral Capsid Assembly: A Quantified Uncertainty Approach
N Clement, M Rasheed, CL Bajaj
Journal of Computational Biology 25 (1), 51-71, 2018
ADaM: augmenting existing approximate fast matching algorithms with efficient and exact range queries
NL Clement, LP Thompson, DP Miranker
BMC bioinformatics 15 (7), S1, 2014
Uncertainty Quantified Computational Analysis of the Energetics of Virus Capsid Assembly
NL Clement, M Rasheed, CL Bajaj
arXiv preprint arXiv:1610.00638, 2016
Parallel Pair-HMM SNP Detection
NL Clement, BA Shepherd, P Bodily, S Tumur-Ochir, Y Gim, Q Snell, ...
2012 IEEE 26th International Parallel and Distributed Processing Symposium …, 2012
Quantified uncertainty of flexible protein-protein docking algorithms
N Clement
arXiv preprint arXiv:1906.10253, 2019
Structure and Function Modeling with Quantified Uncertainties
N Clement
Structure and Function Modeling with Quantified Uncertainty
N Clement
Native Language Attribution in a Transcribed Speech Corpus
B Beth, N Clement
GNUMAP-SNP: A probabilistic pair-hidden Markov model for SNP detection in next-generation sequencing data
NL Clement, BA Shepherd, P Bodily, S Tumir-Ochir, Y Gim, GJ Lyon, ...
submitted, 2011
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Artiklar 1–15