Michael Smoot
Michael Smoot
Illumina, Inc.
Verifierad e-postadress på aescon.com
Titel
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Versatile and open software for comparing large genomes
S Kurtz, A Phillippy, AL Delcher, M Smoot, M Shumway, C Antonescu, ...
Genome biology 5 (2), R12, 2004
38602004
Cytoscape 2.8: new features for data integration and network visualization
ME Smoot, K Ono, J Ruscheinski, PL Wang, T Ideker
Bioinformatics 27 (3), 431-432, 2011
37212011
Integration of biological networks and gene expression data using Cytoscape
MS Cline, M Smoot, E Cerami, A Kuchinsky, N Landys, C Workman, ...
Nature protocols 2 (10), 2366, 2007
21562007
A travel guide to Cytoscape plugins
R Saito, ME Smoot, K Ono, J Ruscheinski, PL Wang, S Lotia, AR Pico, ...
Nature methods 9 (11), 1069, 2012
10772012
Fast statistical alignment
RK Bradley, A Roberts, M Smoot, S Juvekar, J Do, C Dewey, I Holmes, ...
PLoS Comput Biol 5 (5), e1000392, 2009
3502009
A human MAP kinase interactome
S Bandyopadhyay, C Chiang, J Srivastava, M Gersten, S White, R Bell, ...
Nature methods 7 (10), 801, 2010
2052010
NetworkBLAST: comparative analysis of protein networks
M Kalaev, M Smoot, T Ideker, R Sharan
Bioinformatics 24 (4), 594-596, 2008
1242008
Cytoscape: the network visualization tool for GenomeSpace workflows
B Demchak, T Hull, M Reich, T Liefeld, M Smoot, T Ideker, JP Mesirov
F1000Research 3, 2014
862014
Exploring biological networks with Cytoscape software
N Yeung, MS Cline, A Kuchinsky, ME Smoot, GD Bader
Current Protocols in Bioinformatics 23 (1), 8.13. 1-8.13. 20, 2008
612008
Cytoscape 2.8
ME Smoot, K Ono, J Ruscheinski, PL Wang, T Ideker
Bioinformatics 27 (3), 431-432, 2011
512011
PiNGO: a Cytoscape plugin to find candidate genes in biological networks
M Smoot, K Ono, T Ideker, S Maere
Bioinformatics 27 (7), 1030-1031, 2011
402011
Assembling global maps of cellular function through integrative analysis of physical and genetic networks
R Srivas, G Hannum, J Ruscheinski, K Ono, PL Wang, M Smoot, T Ideker
Nature protocols 6 (9), 1308-1323, 2011
242011
Improving pairwise sequence alignment accuracy using near-optimal protein sequence alignments
ML Sierk, ME Smoot, EJ Bass, WR Pearson
BMC bioinformatics 11 (1), 146, 2010
192010
Visualization of near-optimal sequence alignments
ME Smoot, SA Guerlain, WR Pearson
Bioinformatics 20 (6), 953-958, 2004
142004
The protein architecture of human secretory vesicles reveals differential regulation of signaling molecule secretion by protein kinases
SJ Bark, J Wegrzyn, L Taupenot, M Ziegler, DT O'Connor, Q Ma, M Smoot, ...
PloS one 7 (8), e41134, 2012
132012
Deep semantic protein representation for annotation, discovery, and engineering
AS Schwartz, GJ Hannum, ZR Dwiel, ME Smoot, AR Grant, JM Knight, ...
BioRxiv, 365965, 2018
82018
A system for visualizing and analyzing near-optimal protein sequence alignments
ME Smoot, EJ Bass, SA Guerlain, WR Pearson
Information Visualization 4 (3), 224-237, 2005
72005
Cytoscape: the network visualization tool for GenomeSpace
B Demchak, T Hull, M Reich, T Liefeld, M Smoot, T Ideker, JP Mesirov
12014
Network visualization and data analysis using Cytoscape
M Smoot, T Ideker
中国化学会计算机化学专业委员会. 第十届全国计算 (机) 化学学术会议论文摘要集, 2009
12009
workflows [version 1; referees: 3 approved]
B Demchak, T Hull, M Reich, T Liefeld, M Smoot, T Ideker, JP Mesirov
2014
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Artiklar 1–20