Grzegorz Nawrocki
Grzegorz Nawrocki
Verifierad e-postadress på msu.edu - Startsida
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CHARMM36m: an improved force field for folded and intrinsically disordered proteins
J Huang, S Rauscher, G Nawrocki, T Ran, M Feig, BL de Groot, ...
Nature methods 14 (1), 71-73, 2017
6732017
Crowding in cellular environments at an atomistic level from computer simulations
M Feig, I Yu, P Wang, G Nawrocki, Y Sugita
The Journal of Physical Chemistry B 121 (34), 8009-8025, 2017
632017
Slow-down in diffusion in crowded protein solutions correlates with transient cluster formation
G Nawrocki, P Wang, I Yu, Y Sugita, M Feig
The Journal of Physical Chemistry B 121 (49), 11072-11084, 2017
402017
Amino acids and proteins at ZnO–water interfaces in molecular dynamics simulations
G Nawrocki, M Cieplak
Physical Chemistry Chemical Physics 15 (32), 13628-13636, 2013
332013
Aqueous amino acids and proteins near the surface of gold in hydrophilic and hydrophobic force fields
G Nawrocki, M Cieplak
The Journal of Physical Chemistry C 118 (24), 12929-12943, 2014
322014
Effect of protein–protein interactions and solvent viscosity on the rotational diffusion of proteins in crowded environments
G Nawrocki, A Karaboga, Y Sugita, M Feig
Physical Chemistry Chemical Physics 21 (2), 876-883, 2019
132019
Structural aspects of the antioxidant activity of lutein in a model of photoreceptor membranes
A Wisniewska-Becker, G Nawrocki, M Duda, WK Subczynski
Acta Biochimica Polonica 59 (1), 119, 2012
122012
Interactions of aqueous amino acids and proteins with the (110) surface of ZnS in molecular dynamics simulations
G Nawrocki, M Cieplak
The Journal of chemical physics 140 (9), 03B601_1, 2014
102014
Peptide recognition capabilities of cellulose in molecular dynamics simulations
G Nawrocki, PA Cazade, D Thompson, M Cieplak
The Journal of Physical Chemistry C 119 (43), 24404-24416, 2015
92015
Grubmü ller H, MacKerell AD. 2017. CHARMM36m: an improved force field for folded and intrinsically disordered proteins
J Huang, S Rauscher, G Nawrocki, T Ran, M Feig, BL de Groot
Nature Methods 14, 71-73, 0
9
Challenges and opportunities in connecting simulations with experiments via molecular dynamics of cellular environments
M Feig, G Nawrocki, I Yu, P Wang, Y Sugita
Journal of Physics: Conference Series 1036 (1), 012010, 2018
52018
Intramolecular Diffusion in α-Synuclein: It Depends on How You Measure It
J Woodard, KR Srivastava, G Rahamim, A Grupi, S Hogan, DJ Witalka, ...
Biophysical journal 115 (7), 1190-1199, 2018
22018
Clustering and dynamics of crowded proteins near membranes and their influence on membrane bending
G Nawrocki, W Im, Y Sugita, M Feig
Proceedings of the National Academy of Sciences 116 (49), 24562-24567, 2019
2019
Simulations of biomolecules in cellular crowded environments
Y Sugita, K Kasahara, H Oshima, I Yu, G Nawrocki, S Re, M Feig
JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS 37, 51-52, 2019
2019
Elucidating the crowding effect on protein-ligand binding process
K Kasahara, H Oshima, G Nawrocki, I Yu, S Re, M Feig, Y Sugita
ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 257, 2019
2019
Protein Diffusion in a Dense Solution Studied by All-Atom Molecular Dynamics Simulations
G Nawrocki, P Wang, I Yu, Y Sugita, M Feig
Biophysical Journal 114 (3), 233a-234a, 2018
2018
Diffusional dynamics of proteins under crowded conditions
M Feig, G Nawrocki, I Yu, P Wang, Y Sugita, T Kigawa
ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 254, 2017
2017
Structural ensembles of intrinsically disordered proteins using all-atom molecular simulation.
S Rauscher, J Huang, G Nawrocki, T Ran, M Feig, BL de Groot, ...
19th IUPAB Congress/11th EBSA Congress, S65-S65, 2017
2017
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Artiklar 1–18