Association between breast milk bacterial communities and establishment and development of the infant gut microbiome PS Pannaraj, F Li, C Cerini, JM Bender, S Yang, A Rollie, H Adisetiyo, ... JAMA pediatrics 171 (7), 647-654, 2017 | 1009 | 2017 |
Meta-analysis of effects of exclusive breastfeeding on infant gut microbiota across populations NT Ho, F Li, KA Lee-Sarwar, HM Tun, BP Brown, PS Pannaraj, JM Bender, ... Nature communications 9 (1), 4169, 2018 | 366 | 2018 |
Regulatory impact of RNA secondary structure across the Arabidopsis transcriptome F Li, Q Zheng, LE Vandivier, MR Willmann, Y Chen, BD Gregory The Plant Cell 24 (11), 4346-4359, 2012 | 160 | 2012 |
Genome-Wide Double-Stranded RNA Sequencing Reveals the Functional Significance of Base-Paired RNAs in Arabidopsis Q Zheng, P Ryvkin, F Li, I Dragomir, O Valladares, J Yang, K Cao, ... PLoS genetics 6 (9), e1001141, 2010 | 160 | 2010 |
Global analysis of RNA secondary structure in two metazoans F Li, Q Zheng, P Ryvkin, I Dragomir, Y Desai, S Aiyer, O Valladares, ... Cell reports 1 (1), 69-82, 2012 | 151 | 2012 |
Transformation of the intestinal epithelium by the MSI2 RNA-binding protein S Wang, N Li, M Yousefi, A Nakauka-Ddamba, F Li, K Parada, S Rao, ... Nature communications 6 (1), 6517, 2015 | 140 | 2015 |
Essential Role for endogenous siRNAs during meiosis in mouse oocytes P Stein, NV Rozhkov, F Li, FL Cárdenas, O Davydenk, LE Vandivier, ... PLoS genetics 11 (2), e1005013, 2015 | 118 | 2015 |
Contributions to human breast milk microbiome and enteromammary transfer of Bifidobacterium breve K Kordy, T Gaufin, M Mwangi, F Li, C Cerini, DJ Lee, H Adisetiyo, ... PloS one 15 (1), e0219633, 2020 | 110 | 2020 |
Maternal HIV infection influences the microbiome of HIV-uninfected infants JM Bender, F Li, S Martelly, E Byrt, V Rouzier, M Leo, N Tobin, ... Science Translational Medicine 8 (349), 349ra100-349ra100, 2016 | 108 | 2016 |
The Msi family of RNA-binding proteins function redundantly as intestinal oncoproteins N Li, M Yousefi, A Nakauka-Ddamba, F Li, L Vandivier, K Parada, ... Cell reports 13 (11), 2440-2455, 2015 | 105 | 2015 |
RNase-mediated protein footprint sequencing reveals protein-binding sites throughout the human transcriptome IM Silverman, F Li, A Alexander, L Goff, C Trapnell, JL Rinn, BD Gregory Genome biology 15 (1), 1-16, 2014 | 99 | 2014 |
Paternal poly (ADP-ribose) metabolism modulates retention of inheritable sperm histones and early embryonic gene expression M Ihara, ML Meyer-Ficca, NA Leu, S Rao, F Li, BD Gregory, IA Zalenskaya, ... PLoS genetics 10 (5), e1004317, 2014 | 88 | 2014 |
Identification of potential pathway mediation targets in Toll-like receptor signaling F Li, I Thiele, N Jamshidi, BØ Palsson PLoS computational biology 5 (2), e1000292, 2009 | 86 | 2009 |
metamicrobiomeR: an R package for analysis of microbiome relative abundance data using zero-inflated beta GAMLSS and meta-analysis across studies using random effects models NT Ho, F Li, S Wang, L Kuhn BMC bioinformatics 20, 1-15, 2019 | 68 | 2019 |
Single-Cell RNA-Seq Mapping of Human Thymopoiesis Reveals Lineage Specification Trajectories and a Commitment Spectrum in T Cell Development J Le, JE Park, VL Ha, A Luong, S Branciamore, AS Rodin, G Gogoshin, ... Immunity 52 (6), 1105-1118. e9, 2020 | 67 | 2020 |
The T-ALL related gene BCL11B regulates the initial stages of human T-cell differentiation VL Ha, A Luong, F Li, D Casero, J Malvar, YM Kim, R Bhatia, GM Crooks, ... Leukemia 31 (11), 2503-2514, 2017 | 67 | 2017 |
Genomic era analyses of RNA secondary structure and RNA-binding proteins reveal their significance to post-transcriptional regulation in plants IM Silverman, F Li, BD Gregory Plant science 205, 55-62, 2013 | 58 | 2013 |
Quantification of variation and the impact of biomass in targeted 16S rRNA gene sequencing studies JM Bender, F Li, H Adisetiyo, D Lee, S Zabih, L Hung, TA Wilkinson, ... Microbiome 6, 1-12, 2018 | 52 | 2018 |
Effects of Substance Use and Sex Practices on the Intestinal Microbiome During HIV-1 Infection JA Fulcher, SK Hussain, R Cook, F Li, NH Tobin, A Ragsdale, S Shoptaw, ... The Journal of infectious diseases 218 (10), 1560-1570, 2018 | 46 | 2018 |
Autophagic UVRAG promotes UV-induced photolesion repair by activation of the CRL4DDB2 E3 ligase Y Yang, S He, Q Wang, F Li, MJ Kwak, S Chen, D O’Connell, T Zhang, ... Molecular cell 62 (4), 507-519, 2016 | 46 | 2016 |