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Claude dePamphilis
Claude dePamphilis
Distinguished Professor of Plant Biology and Evolutionary Genomics, Penn State University
Verified email at psu.edu
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Cited by
Year
The Genome of Black Cottonwood, Populus trichocarpa (Torr. & Gray)
GA Tuskan, S Difazio, S Jansson, J Bohlmann, I Grigoriev, U Hellsten, ...
science 313 (5793), 1596-1604, 2006
45912006
Ancestral polyploidy in seed plants and angiosperms
Y Jiao, NJ Wickett, S Ayyampalayam, AS Chanderbali, L Landherr, ...
Nature 473 (7345), 97-100, 2011
19162011
The minimum information about a genome sequence (MIGS) specification
D Field, G Garrity, T Gray, N Morrison, J Selengut, P Sterk, T Tatusova, ...
Nature biotechnology 26 (5), 541-547, 2008
12692008
Polyploidy and angiosperm diversification
DE Soltis, VA Albert, J Leebens-Mack, CD Bell, AH Paterson, C Zheng, ...
American journal of botany 96 (1), 336-348, 2009
12322009
The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus)
R Ming, S Hou, Y Feng, Q Yu, A Dionne-Laporte, JH Saw, P Senin, ...
Nature 452 (7190), 991-996, 2008
11682008
Phylotranscriptomic analysis of the origin and early diversification of land plants
NJ Wickett, S Mirarab, N Nguyen, T Warnow, E Carpenter, N Matasci, ...
Proceedings of the National Academy of Sciences 111 (45), E4859-E4868, 2014
10542014
Analysis of 81 genes from 64 plastid genomes resolves relationships in angiosperms and identifies genome-scale evolutionary patterns
RK Jansen, Z Cai, LA Raubeson, H Daniell, CW dePamphilis, ...
Proceedings of the National Academy of Sciences 104 (49), 19369-19374, 2007
9812007
The evolution of the plastid chromosome in land plants: gene content, gene order, gene function
S Wicke, GM Schneeweiss, CW dePamphilis, KF Müller, D Quandt
Plant molecular biology 76 (3-5), 273-297, 2011
9392011
GetOrganelle: a fast and versatile toolkit for accurate de novo assembly of organelle genomes
JJ Jin, WB Yu, JB Yang, Y Song, CW DePamphilis, TS Yi, DZ Li
Genome biology 21, 1-31, 2020
9382020
One thousand plant transcriptomes and the phylogenomics of green plants
Nature 574 (7780), 679-685, 2019
8492019
Widespread genome duplications throughout the history of flowering plants
L Cui, PK Wall, JH Leebens-Mack, BG Lindsay, DE Soltis, JJ Doyle, ...
Genome research 16 (6), 738-749, 2006
8172006
The Selaginella genome identifies genetic changes associated with the evolution of vascular plants
JA Banks, T Nishiyama, M Hasebe, JL Bowman, M Gribskov, ...
science 332 (6032), 960-963, 2011
8102011
Disintegration of the Scrophulariaceae
RG Olmstead, CW dePamphilis, AD Wolfe, ND Young, WJ Elisons, ...
American Journal of Botany 88 (2), 348-361, 2001
7792001
The Amborella Genome and the Evolution of Flowering Plants
Amborella Genome Project, VA Albert, WB Barbazuk, CW dePamphilis, ...
Science 342 (6165), 1241089, 2013
6082013
Data access for the 1,000 Plants (1KP) project
N Matasci, LH Hung, Z Yan, EJ Carpenter, NJ Wickett, S Mirarab, ...
GigaScience 3 (1), 17, 2014
5352014
Phylogeny of seed plants based on all three genomic compartments: Extant gymnosperms are monophyletic and Gnetales' closest relatives are conifers
LM Bowe, G Coat, CW dePamphilis
Proceedings of the National Academy of Sciences 97 (8), 4092-4097, 2000
5222000
The evolution of parasitism in plants
JH Westwood, JI Yoder, MP Timko, CW dePamphilis
Trends in plant science 15 (4), 227-235, 2010
4912010
The Chlamydomonas reinhardtii plastid chromosome islands of genes in a sea of repeats
JE Maul, JW Lilly, L Cui, CW dePamphilis, W Miller, EH Harris, DB Stern
The Plant Cell 14 (11), 2659-2679, 2002
4892002
RNA viruses in hymenopteran pollinators: evidence of inter-taxa virus transmission via pollen and potential impact on non-Apis hymenopteran species
R Singh, AL Levitt, EG Rajotte, EC Holmes, N Ostiguy, WI Lipkin, ...
PLoS One 5 (12), e14357, 2010
4422010
The evolution of the SEPALLATA subfamily of MADS-box genes
LM Zahn, H Kong, JH Leebens-Mack, S Kim, PS Soltis, LL Landherr, ...
Genetics 169 (4), 2209-2223, 2005
4202005
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