| The coffee genome provides insight into the convergent evolution of caffeine biosynthesis F Denoeud, L Carretero-Paulet, A Dereeper, G Droc, R Guyot, M Pietrella, ... science 345 (6201), 1181-1184, 2014 | 631 | 2014 |
| SSR mining in coffee tree EST databases: potential use of EST–SSRs as markers for the Coffea genus V Poncet, M Rondeau, C Tranchant, A Cayrel, S Hamon, A De Kochko, ... Molecular Genetics and Genomics 276, 436-449, 2006 | 228 | 2006 |
| The rise and fall of African rice cultivation revealed by analysis of 246 new genomes P Cubry, C Tranchant-Dubreuil, AC Thuillet, C Monat, MN Ndjiondjop, ... Current Biology 28 (14), 2274-2282. e6, 2018 | 95 | 2018 |
| The coffee genome hub: a resource for coffee genomes A Dereeper, S Bocs, M Rouard, V Guignon, S Ravel, ... Nucleic acids research 43 (D1), D1028-D1035, 2015 | 74 | 2015 |
| Transcriptome analysis during somatic embryogenesis of the tropical monocot Elaeis guineensis: evidence for conserved gene functions in early … HC Lin, F Morcillo, S Dussert, C Tranchant-Dubreuil, JW Tregear, ... Plant Molecular Biology 70, 173-192, 2009 | 71 | 2009 |
| Molecular diversity and gene expression of cotton ERF transcription factors reveal that group IXa members are responsive to jasmonate, ethylene and Xanthomonas A Champion, E Hebrard, B Parra, C Bournaud, P Marmey, C Tranchant, ... Molecular Plant Pathology 10 (4), 471-485, 2009 | 67 | 2009 |
| Genetic structure and diversity of coffee (Coffea) across Africa and the Indian Ocean islands revealed using microsatellites NJ Razafinarivo, R Guyot, AP Davis, E Couturon, S Hamon, D Crouzillat, ... Annals of botany 111 (2), 229-248, 2013 | 56 | 2013 |
| Advances in Coffea genomics A De Kochko, S Akaffou, AC Andrade, C Campa, D Crouzillat, R Guyot, ... Advances in botanical research 53, 23-63, 2010 | 54 | 2010 |
| Micro‐collinearity and genome evolution in the vicinity of an ethylene receptor gene of cultivated diploid and allotetraploid coffee species (Coffea) Q Yu, R Guyot, A De Kochko, A Byers, R Navajas‐Pérez, BJ Langston, ... The Plant Journal 67 (2), 305-317, 2011 | 53 | 2011 |
| Phylogeography and niche modelling of the relict plant Amborella trichopoda (Amborellaceae) reveal multiple Pleistocene refugia in New Caledonia V Poncet, F Munoz, J Munzinger, Y Pillon, C Gomez, M Couderc, ... Molecular Ecology 22 (24), 6163-6178, 2013 | 51 | 2013 |
| Development and evaluation of a genome‐wide Coffee 8.5 K SNP array and its application for high‐density genetic mapping and for investigating the origin of Coffea arabica L. V Merot‐L'anthoene, R Tournebize, O Darracq, V Rattina, M Lepelley, ... Plant biotechnology journal 17 (7), 1418-1430, 2019 | 50 | 2019 |
| Transcriptome analysis reveals differentially expressed genes associated with the mantled homeotic flowering abnormality in oil palm (Elaeis guineensis) T Beulé, C Camps, S Debiesse, C Tranchant, S Dussert, X Sabau, ... Tree genetics & genomes 7, 169-182, 2011 | 41 | 2011 |
| An efficient and rapid protocol for plant nuclear DNA preparation suitable for next generation sequencing methods G Carrier, S Santoni, M Rodier‐Goud, A Canaguier, A De Kochko, ... American journal of botany 98 (1), e13-e15, 2011 | 38 | 2011 |
| Mutations in Rice yellow mottle virus polyprotein P2a involved in RYMV2 gene resistance breakdown A Pinel-Galzi, C Dubreuil-Tranchant, E Hébrard, C Mariac, A Ghesquière, ... Frontiers in plant science 7, 1779, 2016 | 36 | 2016 |
| In silico mining of microsatellites in coding sequences of the date palm (Arecaceae) genome, characterization, and transferability F Aberlenc‐Bertossi, K Castillo, C Tranchant‐Dubreuil, E Chérif, ... Applications in Plant Sciences 2 (1), 1300058, 2014 | 35 | 2014 |
| Ancestral synteny shared between distantly-related plant species from the asterid (Coffea canephora and Solanum Sp.) and rosid (Vitis vinifera) clades R Guyot, F Lefebvre-Pautigny, C Tranchant-Dubreuil, M Rigoreau, ... BMC genomics 13 (1), 1-14, 2012 | 34 | 2012 |
| Plant pangenome: impacts on phenotypes and evolution C Tranchant-Dubreuil, M Rouard, F Sabot Annual Plant Reviews, 2019 | 30 | 2019 |
| Geographical gradients in the genome size variation of wild coffee trees (Coffea) native to Africa and Indian Ocean islands NJ Razafinarivo, JJ Rakotomalala, SC Brown, M Bourge, S Hamon, ... Tree genetics & genomes 8, 1345-1358, 2012 | 28 | 2012 |
| Two novel Ty1-copia retrotransposons isolated from coffee trees can effectively reveal evolutionary relationships in the Coffea genus (Rubiaceae) P Hamon, PO Duroy, C Dubreuil-Tranchant, P Mafra D’Almeida Costa, ... Molecular Genetics and Genomics 285 (6), 447-460, 2011 | 27 | 2011 |
| MoccaDB-an integrative database for functional, comparative and diversity studies in the Rubiaceae family O Plechakova, C Tranchant-Dubreuil, F Benedet, M Couderc, A Tinaut, ... BMC Plant Biology 9 (1), 1-11, 2009 | 27 | 2009 |
