Erik Sonnhammer
Erik Sonnhammer
Stockholm Bioinformatics Centre, DBB, Stockholm University, Science for Life Laboratory
Verifierad e-postadress på scilifelab.se - Startsida
TitelCiteras avÅr
The Pfam protein families database
M Punta, PC Coggill, RY Eberhardt, J Mistry, J Tate, C Boursnell, N Pang, ...
Nucleic acids research 40 (D1), D290-D301, 2011
11593*2011
Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes
A Krogh, BÈ Larsson, G Von Heijne, ELL Sonnhammer
Journal of molecular biology 305 (3), 567-580, 2001
84302001
The Pfam protein families database
A Bateman, L Coin, R Durbin, RD Finn, V Hollich, S Griffiths‐Jones, ...
Nucleic acids research 32 (suppl_1), D138-D141, 2004
35652004
The Pfam protein families database
A Bateman, E Birney, L Cerruti, R Durbin, L Etwiller, SR Eddy, ...
Nucleic acids research 30 (1), 276-280, 2002
26202002
A hidden Markov model for predicting transmembrane helices in protein sequences.
ELL Sonnhammer, G Von Heijne, A Krogh
Ismb 6, 175-182, 1998
23331998
Pfam: clans, web tools and services
RD Finn, J Mistry, B Schuster-Böckler, S Griffiths-Jones, V Hollich, ...
Nucleic acids research 34 (suppl_1), D247-D251, 2006
22902006
2.2 Mb of contiguous nucleotide sequence from chromosome III of C. elegans
R Wilson, R Ainscough, K Anderson, C Baynes, M Berks, J Bonfield, ...
Nature 368 (6466), 32, 1994
16821994
A combined transmembrane topology and signal peptide prediction method
L Käll, A Krogh, ELL Sonnhammer
Journal of molecular biology 338 (5), 1027-1036, 2004
15932004
The Pfam protein families database
A Bateman, E Birney, R Durbin, SR Eddy, KL Howe, ELL Sonnhammer
Nucleic acids research 28 (1), 263-266, 2000
15802000
Automatic clustering of orthologs and in-paralogs from pairwise species comparisons
M Remm, CEV Storm, ELL Sonnhammer
Journal of molecular biology 314 (5), 1041-1052, 2001
12972001
Pfam: a comprehensive database of protein domain families based on seed alignments
ELL Sonnhammer, SR Eddy, R Durbin
Proteins: Structure, Function, and Bioinformatics 28 (3), 405-420, 1997
12061997
Advantages of combined transmembrane topology and signal peptide prediction—the Phobius web server
L Käll, A Krogh, ELL Sonnhammer
Nucleic acids research 35 (suppl_2), W429-W432, 2007
7762007
Pfam: multiple sequence alignments and HMM-profiles of protein domains
ELL Sonnhammer, SR Eddy, E Birney, A Bateman, R Durbin
Nucleic acids research 26 (1), 320-322, 1998
7741998
A dot-matrix program with dynamic threshold control suited for genomic DNA and protein sequence analysis
ELL Sonnhammer, R Durbin
Gene 167 (1), GC1-GC10, 1995
7191995
Inparanoid: a comprehensive database of eukaryotic orthologs
KP O'brien, M Remm, ELL Sonnhammer
Nucleic acids research 33 (suppl_1), D476-D480, 2005
7142005
Pfam 3.1: 1313 multiple alignments and profile HMMs match the majority of proteins
A Bateman, E Birney, R Durbin, SR Eddy, RD Finn, ELL Sonnhammer
Nucleic acids research 27 (1), 260-262, 1999
6241999
InParanoid 7: new algorithms and tools for eukaryotic orthology analysis
G Östlund, T Schmitt, K Forslund, T Köstler, DN Messina, S Roopra, ...
Nucleic acids research 38 (suppl_1), D196-D203, 2009
5712009
Kalign–an accurate and fast multiple sequence alignment algorithm
T Lassmann, ELL Sonnhammer
BMC bioinformatics 6 (1), 298, 2005
5642005
Orthology, paralogy and proposed classification for paralog subtypes
ELL Sonnhammer, EV Koonin
TRENDS in Genetics 18 (12), 619-620, 2002
3932002
FAT: a novel domain in PIK-related kinases
R Bosotti, A Isacchi, ELL Sonnhammer
Trends in biochemical sciences 25 (5), 225-227, 2000
3382000
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Artiklar 1–20