Erik Sonnhammer
Erik Sonnhammer
Stockholm Bioinformatics Centre, DBB, Stockholm University, Science for Life Laboratory
Verifierad e-postadress på scilifelab.se - Startsida
TitelCiteras avÅr
The Pfam protein families database
M Punta, PC Coggill, RY Eberhardt, J Mistry, J Tate, C Boursnell, N Pang, ...
Nucleic acids research 40 (D1), D290-D301, 2011
11632*2011
Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes
A Krogh, BÈ Larsson, G Von Heijne, ELL Sonnhammer
Journal of molecular biology 305 (3), 567-580, 2001
86582001
The Pfam protein families database
A Bateman, L Coin, R Durbin, RD Finn, V Hollich, S Griffiths‐Jones, ...
Nucleic acids research 32 (suppl_1), D138-D141, 2004
33992004
A hidden Markov model for predicting transmembrane helices in protein sequences.
ELL Sonnhammer, G Von Heijne, A Krogh
Ismb 6, 175-182, 1998
23581998
The Pfam protein families database
A Bateman, E Birney, L Cerruti, R Durbin, L Etwiller, SR Eddy, ...
Nucleic acids research 30 (1), 276-280, 2002
23502002
Pfam: clans, web tools and services
RD Finn, J Mistry, B Schuster-Böckler, S Griffiths-Jones, V Hollich, ...
Nucleic acids research 34 (suppl_1), D247-D251, 2006
23012006
2.2 Mb of contiguous nucleotide sequence from chromosome III of C. elegans
R Wilson, R Ainscough, K Anderson, C Baynes, M Berks, J Bonfield, ...
Nature 368 (6466), 32, 1994
16841994
A combined transmembrane topology and signal peptide prediction method
L Käll, A Krogh, ELL Sonnhammer
Journal of molecular biology 338 (5), 1027-1036, 2004
16362004
The Pfam protein families database
A Bateman, E Birney, R Durbin, SR Eddy, KL Howe, ELL Sonnhammer
Nucleic acids research 28 (1), 263-266, 2000
14062000
Automatic clustering of orthologs and in-paralogs from pairwise species comparisons
M Remm, CEV Storm, ELL Sonnhammer
Journal of molecular biology 314 (5), 1041-1052, 2001
13182001
Pfam: a comprehensive database of protein domain families based on seed alignments
ELL Sonnhammer, SR Eddy, R Durbin
Proteins: Structure, Function, and Bioinformatics 28 (3), 405-420, 1997
12251997
Advantages of combined transmembrane topology and signal peptide prediction—the Phobius web server
L Käll, A Krogh, ELL Sonnhammer
Nucleic acids research 35 (suppl_2), W429-W432, 2007
8182007
Pfam: multiple sequence alignments and HMM-profiles of protein domains
ELL Sonnhammer, SR Eddy, E Birney, A Bateman, R Durbin
Nucleic acids research 26 (1), 320-322, 1998
7931998
Inparanoid: a comprehensive database of eukaryotic orthologs
KP O'brien, M Remm, ELL Sonnhammer
Nucleic acids research 33 (suppl_1), D476-D480, 2005
7252005
A dot-matrix program with dynamic threshold control suited for genomic DNA and protein sequence analysis
ELL Sonnhammer, R Durbin
Gene 167 (1-2), GC1-GC10, 1995
7241995
Pfam 3.1: 1313 multiple alignments and profile HMMs match the majority of proteins
A Bateman, E Birney, R Durbin, SR Eddy, RD Finn, ELL Sonnhammer
Nucleic acids research 27 (1), 260-262, 1999
6261999
InParanoid 7: new algorithms and tools for eukaryotic orthology analysis
G Östlund, T Schmitt, K Forslund, T Köstler, DN Messina, S Roopra, ...
Nucleic acids research 38 (suppl_1), D196-D203, 2009
5822009
Kalign–an accurate and fast multiple sequence alignment algorithm
T Lassmann, ELL Sonnhammer
BMC bioinformatics 6 (1), 298, 2005
5772005
Orthology, paralogy and proposed classification for paralog subtypes
ELL Sonnhammer, EV Koonin
TRENDS in Genetics 18 (12), 619-620, 2002
3962002
Database issue
A Bateman, L Coin, R Durbin, RD Finn, V Hollich, S Griffiths-Jones, ...
Nucleic Acids Res 32, D138-D141, 2004
3832004
Systemet kan inte utföra åtgärden just nu. Försök igen senare.
Artiklar 1–20