Richard Sallari
Richard Sallari
Broad Institute
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Integrative analysis of 111 reference human epigenomes
A Kundaje, W Meuleman, J Ernst, M Bilenky, A Yen, A Heravi-Moussavi, ...
Nature 518 (7539), 317-330, 2015
Gut microbial colonisation in premature neonates predicts neonatal sepsis
JC Madan, RC Salari, D Saxena, L Davidson, GA O'Toole, JH Moore, ...
Archives of Disease in Childhood-Fetal and Neonatal Edition 97 (6), F456-F462, 2012
Combinatorial effects of multiple enhancer variants in linkage disequilibrium dictate levels of gene expression to confer susceptibility to common traits
O Corradin, A Saiakhova, B Akhtar-Zaidi, L Myeroff, J Willis, ...
Genome research 24 (1), 1-13, 2014
Epigenomic enhancer profiling defines a signature of colon cancer
B Akhtar-Zaidi, R Cowper-Sal, O Corradin, A Saiakhova, CF Bartels, ...
Science 336 (6082), 736-739, 2012
microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
AM Heimberg, R Cowper-Sal, M Sémon, PCJ Donoghue, KJ Peterson
Proceedings of the National Academy of Sciences 107 (45), 19379-19383, 2010
Breast cancer risk–associated SNPs modulate the affinity of chromatin for FOXA1 and alter gene expression
R Cowper-Sal, X Zhang, JB Wright, SD Bailey, MD Cole, J Eeckhoute, ...
Nature genetics 44 (11), 1191-1198, 2012
Intratumor DNA methylation heterogeneity reflects clonal evolution in aggressive prostate cancer
D Brocks, Y Assenov, S Minner, O Bogatyrova, R Simon, C Koop, ...
Cell reports 8 (3), 798-806, 2014
ZNF143 provides sequence specificity to secure chromatin interactions at gene promoters
SD Bailey, X Zhang, K Desai, M Aid, O Corradin, R Cowper-Sal, ...
Nature communications 6 (1), 1-10, 2015
Integrative functional genomics identifies an enhancer looping to the SOX9 gene disrupted by the 17q24. 3 prostate cancer risk locus
X Zhang, R Cowper-Sal, SD Bailey, JH Moore, M Lupien
Genome research 22 (8), 1437-1446, 2012
Evidence that breast cancer risk at the 2q35 locus is mediated through IGFBP5 regulation
M Ghoussaini, SL Edwards, K Michailidou, S Nord, R Cowper-Sal, ...
Nature communications 5 (1), 1-12, 2014
Breast cancer risk variants at 6q25 display different phenotype associations and regulate ESR1, RMND1 and CCDC170
AM Dunning, K Michailidou, KB Kuchenbaecker, D Thompson, JD French, ...
Nature genetics 48 (4), 374-386, 2016
MicroRNAs and regeneration: Let-7 members as potential regulators of dedifferentiation in lens and inner ear hair cell regeneration of the adult newt
PA Tsonis, MK Call, MW Grogg, MA Sartor, RR Taylor, A Forge, R Fyffe, ...
Biochemical and biophysical research communications 362 (4), 940-945, 2007
Noncoding somatic and inherited single-nucleotide variants converge to promote ESR1 expression in breast cancer
SD Bailey, K Desai, KJ Kron, P Mazrooei, NA Sinnott-Armstrong, ...
Nature genetics 48 (10), 1260, 2016
Epigenetics and epigenomics: implications for diabetes and obesity
ED Rosen, KH Kaestner, R Natarajan, ME Patti, R Sallari, M Sander, ...
Diabetes 67 (10), 1923-1931, 2018
Functional enhancers shape extrachromosomal oncogene amplifications
AR Morton, N Dogan-Artun, ZJ Faber, G MacLeod, CF Bartels, MS Piazza, ...
Cell 179 (6), 1330-1341. e13, 2019
Systems genetics for drug target discovery
NM Penrod, R Cowper-Sal-lari, JH Moore
Trends in pharmacological sciences 32 (10), 623-630, 2011
Microarray analysis of cytoplasmic versus whole cell RNA reveals a considerable number of missed and false positive mRNAs
HW Trask, R Cowper-Sal-lari, MA Sartor, J Gui, CV Heath, J Renuka, ...
RNA 15 (10), 1917-1928, 2009
Pan-cancer screen for mutations in non-coding elements with conservation and cancer specificity reveals correlations with expression and survival
H Hornshřj, MM Nielsen, NA Sinnott-Armstrong, MP Świtnicki, M Juul, ...
NPJ genomic medicine 3 (1), 1-14, 2018
Chromatin profiling reveals regulatory network shifts and a protective role for hepatocyte nuclear factor 4α during colitis
S Chahar, V Gandhi, S Yu, K Desai, R Cowper-Sal, Y Kim, AO Perekatt, ...
Molecular and cellular biology 34 (17), 3291-3304, 2014
Layers of epistasis: genome‐wide regulatory networks and network approaches to genome‐wide association studies
R Cowper‐Salˇ lari, MD Cole, MR Karagas, M Lupien, JH Moore
Wiley Interdisciplinary Reviews: Systems Biology and Medicine 3 (5), 513-526, 2011
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