Thomas Mailund

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Mikkel Heide SchierupProfessor, Bioinformatics Research Centre, Aarhus UniversityVerified email at birc.au.dk
Christian Nørgaard Storm PedersenBioinformatics Research Centre (BiRC) and Department of Computer Science, Aarhus UniversityVerified email at birc.au.dk
Asger HobolthProfessor, Department of Mathematics, Aarhus UniversityVerified email at math.au.dk
Kasper MunchBioinformatics Research Centre, Aarhus UniversityVerified email at daimi.au.dk
Julien Yann DutheilMax Planck Institute for Evolutionary BiologyVerified email at evolbio.mpg.de
Lars M KristensenProfessor in Computer Science - Western Norway University of Applied SciencesVerified email at hvl.no
Søren BesenbacherAssociate Professor at the Department of Molecular Medicine, Aarhus UniversityVerified email at birc.au.dk
Gerth Stølting BrodalAarhus UniversityVerified email at cs.au.dk
Andreas SandPhD student at Bioinformatics Research Centre and Department of Computer Science, Aarhus UniversityVerified email at cs.au.dk
Tomas Marques-BonetICREA Research Professor @ Universitat Pompeu Fabra / IBE (CSIC-UPF) / CNAG-CRGVerified email at upf.edu
Leif SchauserQIAGEN AahusVerified email at qiagen.com
Frank Grønlund JørgensenTørring GymnasiumVerified email at toerring-gym.dk
KIWOONG NAMINRAVerified email at inra.fr
Jade ChengUniversity of California Berkeley, Copenhagen University Denmark, Aarhus University DenmarkVerified email at cs.au.dk
Soren ChristensenAarhus UniversityVerified email at cs.au.dk
Martin SimonsenVerified email at clcbio.com
Gerton LunterAssociate Professor, University of OxfordVerified email at well.ox.ac.uk
Michael WestergaardEindhoven Technical University (the Netherlands)Verified email at tue.nl
Mathieu EMILYMaitre de conference HDR - Associate professor - Agrocampus OuestVerified email at agrocampus-ouest.fr
Søren BrunakProfessor of Disease Systems Biology, University of CopenhagenVerified email at cpr.ku.dk

Thomas Mailund

Associate Professor of Bioinformatics, Aarhus University

Verified email at birc.au.dk

Bioinformatics Genetics Molecular evolution Programming


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Great ape genetic diversity and population history J Prado-Martinez, PH Sudmant, JM Kidd, H Li, JL Kelley, ... Nature 499 (7459), 471-475, 2013	714	2013
Insights into hominid evolution from the gorilla genome sequence A Scally, JY Dutheil, LDW Hillier, GE Jordan, I Goodhead, J Herrero, ... Nature 483 (7388), 169-175, 2012	702	2012
Comparative and demographic analysis of orang-utan genomes DP Locke, LDW Hillier, WC Warren, KC Worley, LV Nazareth, DM Muzny, ... Nature 469 (7331), 529-533, 2011	588	2011
The bonobo genome compared with the chimpanzee and human genomes K Prüfer, K Munch, I Hellmann, K Akagi, JR Miller, B Walenz, S Koren, ... Nature 486 (7404), 527-531, 2012	518	2012
Genomic relationships and speciation times of human, chimpanzee, and gorilla inferred from a coalescent hidden Markov model A Hobolth, OF Christensen, T Mailund, MH Schierup PLoS genetics 3 (2), e7, 2007	350	2007
A genomic history of Aboriginal Australia AS Malaspinas, MC Westaway, C Muller, VC Sousa, O Lao, I Alves, ... Nature 538 (7624), 207-214, 2016	346	2016
Pigs in sequence space: a 0.66 X coverage pig genome survey based on shotgun sequencing R Wernersson, M Schierup, F Jørgensen, J Gorodkin, F Panitz, ... BMC genomics 6 (1), 70, 2005	326	2005
Polar and brown bear genomes reveal ancient admixture and demographic footprints of past climate change W Miller, SC Schuster, AJ Welch, A Ratan, OC Bedoya-Reina, F Zhao, ... Proceedings of the National Academy of Sciences 109 (36), E2382-E2390, 2012	307	2012
Incomplete lineage sorting patterns among human, chimpanzee, and orangutan suggest recent orangutan speciation and widespread selection A Hobolth, JY Dutheil, J Hawks, MH Schierup, T Mailund Genome research 21 (3), 349-356, 2011	207	2011
Using biological networks to search for interacting loci in genome-wide association studies M Emily, T Mailund, J Hein, L Schauser, MH Schierup European Journal of Human Genetics 17 (10), 1231-1240, 2009	184	2009
A sweep-line method for state space exploration S Christensen, L Kristensen, T Mailund Tools and Algorithms for the Construction and Analysis of Systems, 450-464, 2001	165	2001
Novel variation and de novo mutation rates in population-wide de novo assembled Danish trios S Besenbacher, S Liu, JMG Izarzugaza, J Grove, K Belling, J Bork-Jensen, ... Nature communications 6 (1), 1-9, 2015	137	2015
Rapid neighbour-joining M Simonsen, T Mailund, C Pedersen Algorithms in Bioinformatics, 113-122, 2008	114	2008
Ancestral population genomics: the coalescent hidden Markov model approach JY Dutheil, G Ganapathy, A Hobolth, T Mailund, MK Uyenoyama, ... Genetics 183 (1), 259, 2009	111	2009
A new isolation with migration model along complete genomes infers very different divergence processes among closely related great ape species T Mailund, AE Halager, M Westergaard, JY Dutheil, K Munch, ... PLoS genetics 8 (12), e1003125, 2012	105	2012
Estimating Divergence Time and Ancestral Effective Population Size of Bornean and Sumatran Orangutan Subspecies Using a Coalescent Hidden Markov Model T Mailund, JY Dutheil, A Hobolth, G Lunter, MH Schierup PLoS Genetics 7 (3), e1001319, 2011	100	2011
Sequencing and de novo assembly of 150 genomes from Denmark as a population reference L Maretty, JM Jensen, B Petersen, JA Sibbesen, S Liu, P Villesen, L Skov, ... Nature 548 (7665), 87-91, 2017	99	2017
A comprehensive genomic history of extinct and living elephants E Palkopoulou, M Lipson, S Mallick, S Nielsen, N Rohland, S Baleka, ... Proceedings of the National Academy of Sciences 115 (11), E2566-E2574, 2018	90	2018
Cultural phylogenetics of the Tupi language family in lowland South America RS Walker, S Wichmann, T Mailund, CJ Atkisson PloS one 7 (4), e35025, 2012	90	2012
Extensive X-linked adaptive evolution in central chimpanzees C Hvilsom, Y Qian, T Bataillon, Y Li, T Mailund, B Sallé, F Carlsen, R Li, ... Proceedings of the National Academy of Sciences 109 (6), 2054-2059, 2012	88	2012

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