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M. Stanley Fujimoto
M. Stanley Fujimoto
Ancestry
Verifierad e-postadress på ancestry.com
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Overcoming the loss of blue sensitivity through opsin duplication in the largest animal group, beetles
CR Sharkey, MS Fujimoto, NP Lord, S Shin, DD McKenna, A Suvorov, ...
Scientific Reports 7 (1), 8, 2017
872017
Deep ancestral introgression shapes evolutionary history of dragonflies and damselflies
A Suvorov, C Scornavacca, MS Fujimoto, P Bodily, M Clement, ...
Systematic biology 71 (3), 526-546, 2022
362022
Opsins have evolved under the permanent heterozygote model: insights from phylotranscriptomics of Odonata
A Suvorov, NO Jensen, CR Sharkey, MS Fujimoto, P Bodily, ...
Molecular ecology 26 (5), 1306-1322, 2017
352017
Effects of error-correction of heterozygous next-generation sequencing data
MS Fujimoto, PM Bodily, N Okuda, MJ Clement, Q Snell
BMC bioinformatics 15 (7), S3, 2014
252014
Detecting false positive sequence homology: a machine learning approach
MS Fujimoto, A Suvorov, NO Jensen, MJ Clement, SM Bybee
BMC bioinformatics 17, 1-11, 2016
232016
A novel approach for multi-SNP GWAS and its application in Alzheimer’s disease
PM Bodily, MS Fujimoto, JT Page, MJ Clement, MTW Ebbert, PG Ridge, ...
BMC bioinformatics 17, 455-463, 2016
212016
BART for post-correction of OCR newspaper text
E Soper, S Fujimoto, YY Yu
Proceedings of the Seventh Workshop on Noisy User-generated Text (W-NUT 2021 …, 2021
192021
ScaffoldScaffolder: solving contig orientation via bidirected to directed graph reduction
PM Bodily, MS Fujimoto, Q Snell, D Ventura, MJ Clement
Bioinformatics 32 (1), 17-24, 2016
142016
Heterozygous genome assembly via binary classification of homologous sequence
PM Bodily, MS Fujimoto, C Ortega, N Okuda, JC Price, MJ Clement, ...
BMC bioinformatics 16, 1-10, 2015
132015
The OGCleaner: filtering false-positive homology clusters
MS Fujimoto, A Suvorov, NO Jensen, MJ Clement, Q Snell, SM Bybee
Bioinformatics 33 (1), 125-127, 2017
102017
Whole Genome Phylogenetic Tree Reconstruction Using Colored de Bruijn Graphs
CA Lyman, MS Fujimoto, A Suvorov, PM Bodily, Q Snell, KA Crandall, ...
arXiv preprint arXiv:1709.00164, 2017
52017
Active transfer learning for handwriting recognition
E Burdett, S Fujimoto, T Brown, A Shurtz, D Segrera, L Sorenson, ...
International Conference on Frontiers in Handwriting Recognition, 245-258, 2022
42022
The PepSeq Pipeline: Software for antimicrobial motif discovery in randomly-generated peptide libraries
TD Jensen, KA Bresciano, E Dallon, MS Fujimoto, CA Lyman, E Stewart, ...
Proceedings of the 2018 ACM International Conference on Bioinformatics …, 2018
42018
Modeling Global and local Codon Bias with Deep Language Models
MS Fujimoto, PM Bodily, CA Lyman, AJ Jacobsen, Q Snell, MJ Clement
Bioinformatics and Bioengineering (BIBE), 2017 IEEE 17th International …, 2017
42017
Genome Polymorphism Detection Through Relaxed de Bruijn Graph Construction
MS Fujimoto, C Lyman, A Suvorov, P Bodily, Q Snell, K Crandall, S Bybee, ...
2017 IEEE 17th International Conference on Bioinformatics and Bioengineering …, 2017
42017
A structured approach to ensemble learning for Alzheimer's disease prediction
M Seeley, M Clement, C Giraud-Carrier, Q Snell, P Bodily, S Fujimoto
Proceedings of the 5th ACM Conference on Bioinformatics, Computational …, 2014
32014
Kcollections: A fast and efficient library for k-mers
MS Fujimoto, CA Lyman, MJ Clement
2020 IEEE International Parallel and Distributed Processing Symposium …, 2020
22020
The Polygraph: A Data Structure for Genome Alignment and Variation Detection
M Fujimoto, C Lyman, M Clement
Proceedings of 11th International Conference on Bioinformatics and …, 2019
22019
Learning the Language of Genes: Representing Global Codon Bias with Deep Language Models
MS Fujimoto, PM Bodily, CA Lyman, JA Jacobsen, MJ Clement
22017
Automated Cause-of-Death Tagging from 1918 Ohio Death Records
J Price, M Clement, S Fujimoto, J Merrell, S Rawlings, A Bay
Available at SSRN 3781891, 2021
12021
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Artiklar 1–20