Zoran Nikoloski
Zoran Nikoloski
Professor of Bioinformatics, University of Potsdam
Verifierad e-postadress på mpimp-golm.mpg.de
Citeras av
Citeras av
On modularity clustering
U Brandes, D Delling, M Gaertler, R Gorke, M Hoefer, Z Nikoloski, ...
IEEE transactions on knowledge and data engineering 20 (2), 172-188, 2007
On finding graph clusterings with maximum modularity
U Brandes, D Delling, M Gaertler, R Görke, M Hoefer, Z Nikoloski, ...
International Workshop on Graph-Theoretic Concepts in Computer Science, 121-132, 2007
PlaNet: combined sequence and expression comparisons across plant networks derived from seven species
M Mutwil, S Klie, T Tohge, FM Giorgi, O Wilkins, MM Campbell, AR Fernie, ...
The Plant Cell 23 (3), 895-910, 2011
Metabolic fluxes in an illuminated Arabidopsis rosette
M Szecowka, R Heise, T Tohge, A Nunes-Nesi, D Vosloh, J Huege, R Feil, ...
The Plant Cell 25 (2), 694-714, 2013
Metabolic control and regulation of the tricarboxylic acid cycle in photosynthetic and heterotrophic plant tissues
WL Araujo, A NUNES‐NESI, Z Nikoloski, LJ Sweetlove, AR Fernie
Plant, cell & environment 35 (1), 1-21, 2012
Maximizing modularity is hard
U Brandes, D Delling, M Gaertler, R Görke, M Hoefer, Z Nikoloski, ...
arXiv preprint physics/0608255, 2006
Genome-wide association in tomato reveals 44 candidate loci for fruit metabolic traits
C Sauvage, V Segura, G Bauchet, R Stevens, PT Do, Z Nikoloski, ...
Plant physiology 165 (3), 1120-1132, 2014
Inner composition alignment for inferring directed networks from short time series
S Hempel, A Koseska, J Kurths, Z Nikoloski
Physical review letters 107 (5), 054101, 2011
Integrative comparative analyses of transcript and metabolite profiles from pepper and tomato ripening and development stages uncovers species-specific patterns of network …
S Osorio, R Alba, Z Nikoloski, A Kochevenko, AR Fernie, JJ Giovannoni
Plant Physiology 159 (4), 1713-1729, 2012
Identification and mode of inheritance of quantitative trait loci for secondary metabolite abundance in tomato
S Alseekh, T Tohge, R Wendenberg, F Scossa, N Omranian, J Li, ...
The Plant Cell 27 (3), 485-512, 2015
Metabolic variation between japonica and indica rice cultivars as revealed by non-targeted metabolomics
C Hu, J Shi, S Quan, B Cui, S Kleessen, Z Nikoloski, T Tohge, ...
Scientific reports 4, 5067, 2014
Metabolite profiling and network analysis reveal coordinated changes in grapevine water stress response
U Hochberg, A Degu, D Toubiana, T Gendler, Z Nikoloski, ...
BMC Plant Biology 13 (1), 1-16, 2013
Gene regulatory network inference using fused LASSO on multiple data sets
N Omranian, JMO Eloundou-Mbebi, B Mueller-Roeber, Z Nikoloski
Scientific reports 6, 20533, 2016
Large-scale co-expression approach to dissect secondary cell wall formation across plant species
C Ruprecht, M Mutwil, F Saxe, M Eder, Z Nikoloski, S Persson
Frontiers in Plant Science 2, 23, 2011
Metabolic profiling of a mapping population exposes new insights in the regulation of seed metabolism and seed, fruit, and plant relations
D Toubiana, Y Semel, T Tohge, R Beleggia, L Cattivelli, L Rosental, ...
PLoS Genet 8 (3), e1002612, 2012
Systems analysis of the response of photosynthesis, metabolism, and growth to an increase in irradiance in the photosynthetic model organism Chlamydomonas reinhardtii
T Mettler, T Mühlhaus, D Hemme, MA Schöttler, J Rupprecht, A Idoine, ...
The Plant Cell 26 (6), 2310-2350, 2014
Genetic determinants of the network of primary metabolism and their relationships to plant performance in a maize recombinant inbred line population
W Wen, K Li, S Alseekh, N Omranian, L Zhao, Y Zhou, Y Xiao, M Jin, ...
The Plant Cell 27 (7), 1839-1856, 2015
Network analysis: tackling complex data to study plant metabolism
D Toubiana, AR Fernie, Z Nikoloski, A Fait
Trends in biotechnology 31 (1), 29-36, 2013
Relationships of leaf net photosynthesis, stomatal conductance, and mesophyll conductance to primary metabolism: a multispecies meta-analysis approach
J Gago, D de Menezes Daloso, CM Figueroa, J Flexas, AR Fernie, ...
Plant Physiology 171 (1), 265-279, 2016
Decreased nucleotide and expression diversity and modified coexpression patterns characterize domestication in the common bean
E Bellucci, E Bitocchi, A Ferrarini, A Benazzo, E Biagetti, S Klie, A Minio, ...
The Plant Cell 26 (5), 1901-1912, 2014
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