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Robert Vaser
Robert Vaser
University of Zagreb, Faculty of Electrical Engineering and Computing
Verifierad e-postadress på fer.hr
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Fast and accurate de novo genome assembly from long uncorrected reads
R Vaser, I Sovic, N Nagarajan, M Sikic
Genome research, 2017
21172017
SIFT missense predictions for genomes
R Vaser, S Adusumalli, SN Leng, M Sikic, PC Ng
Nature protocols 11 (1), 1-9, 2016
11722016
Time-and memory-efficient genome assembly with Raven
R Vaser, M Šikić
Nature Computational Science 1 (5), 332-336, 2021
1952021
Raven: a de novo genome assembler for long reads
R Vaser, M Šikić
BioRxiv, 2020.08. 07.242461, 2020
442020
Yet another de novo genome assembler
R Vaser, M Šikić
2019 11th International Symposium on Image and Signal Processing and …, 2019
312019
SWORD—a highly efficient protein database search
R Vaser, D Pavlović, M Šikić
Bioinformatics 32 (17), i680-i684, 2016
272016
Efficacy of next-generation sequencing in bacterial zoonoses diagnostics
S Duvnjak, Ž Pavlinec, R Vaser, K Križanović, M Šikić, M Zdelar-Tuk, I Reil, ...
Veterinarska stanica 53 (1), 1-10, 2022
42022
Protein database search optimization based on CUDA and MPI
D Pavlović, R Vaser, M Korpar, M Šikić
2013 36th International Convention on Information and Communication …, 2013
42013
Genome assembly and chemogenomic profiling of National Flower of Singapore Papilionanthe Miss Joaquim ‘Agnes’ reveals metabolic pathways regulating floral …
AH Lim, ZJ Low, PN Shingate, JH Hong, SC Chong, CCY Ng, W Liu, ...
Communications biology 5 (1), 967, 2022
32022
Approaches to haplotype assembly
R Vaser
Laboratory for Bioinformatics and Computational Biology, 2016
22016
Whole genome comparison of Vibrio harveyi strains from the Mediterranean Sea
Ž Pavlinec, R Vaser, IG Zupičić, S Zrnčić, D Oraić, M Šikić
20th International Conference on Diseases of Fish and Shellfish (EAFP 2021 …, 2021
12021
Učinkovitost sljedeće generacije sekvenciranja u dijagnostici bakterijskih zoonoza
S Duvnjak, Ž Pavlinec, R Vaser, K Križanović, M Šikić, M Zdelar-Tuk, I Reil, ...
Veterinarska stanica 53 (1), 1-10, 2022
2022
Genome Sequence Reconstruction Using Gated Graph Convolutional Network
L Vrček, R Vaser, T Laurent, M Sikic, X Bresson
2021
Algorithms for de novo assembly of large genomes.
R Vaser
University of Zagreb. Faculty of Electrical Engineering and Computing …, 2019
2019
Algorithms for Layout Phase of De Novo Genome Assembly
R Vaser, M Šikić
Second International Workshop on Data Science, 86-87, 2017
2017
Ra–Rapid de novo genome assembler
R Vaser, M Šikić
ISMB/ECCB 2017, 1-1, 2017
2017
Rala-Rapid layout module for de novo genome assembly
R Vaser, M Šikić
ISMB/ECCB 2017, 1-1, 2017
2017
TGTP-DB–a database for extracting genome, transcriptome and proteome data using taxonomy
K Križanović, M Marinović, A Bulović, R Vaser, M Šikić
MIPRO 2016, 472-476, 2016
2016
Deep learning approach to determining the type of long reads
L Vrček, MHH Huang, R Vaser, M Šikić
International Conference on Intelligent Systems for Molecular Biology 2020, 0
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Artiklar 1–19