Följ
Stian Soiland-Reyes
Stian Soiland-Reyes
Technical Architect, School of Computer Science, University of Manchester
Verifierad e-postadress på manchester.ac.uk - Startsida
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The Taverna workflow suite: designing and executing workflows of Web Services on the desktop, web or in the cloud
K Wolstencroft, R Haines, D Fellows, A Williams, D Withers, S Owen, ...
Nucleic acids research 41 (W1), W557-W561, 2013
9112013
PROV-O: The PROV Ontology
T Lebo, S Sahoo, D McGuinness, K Belhajjame, J Cheney, D Corsar, ...
W3C Recommendation, 2013
784*2013
Taverna, reloaded
P Missier, S Soiland-Reyes, S Owen, W Tan, A Nenadic, I Dunlop, ...
Scientific and Statistical Database Management: 22nd International …, 2010
2562010
Common workflow language, v1.0
P Amstutz, MR Crusoe, N Tijanić, B Chapman, J Chilton, M Heuer, ...
Figshare, 2016
236*2016
Workflow-centric research objects: First class citizens in scholarly discourse.
Ó Corcho, D Garijo Verdejo, K Belhajjame, J Zhao, P Missier, D Newman, ...
Informatica, 2012
1662012
PROV model primer
K Belhajjame, H Deus, D Garijo, G Klyne, P Missier, S Soiland-Reyes, ...
URL: http://www.w3.org/TR/prov-primer, 2012
145*2012
COMBINE archive and OMEX format: one file to share all information to reproduce a modeling project
FT Bergmann, R Adams, S Moodie, J Cooper, M Glont, M Golebiewski, ...
BMC bioinformatics 15 (1), 1-9, 2014
1342014
Identifiers for the 21st century: How to design, provision, and reuse persistent identifiers to maximize utility and impact of life science data
JA McMurry, N Juty, N Blomberg, T Burdett, T Conlin, N Conte, M Courtot, ...
PLoS biology 15 (6), e2001414, 2017
1282017
PAV ontology: provenance, authoring and versioning
P Ciccarese, S Soiland-Reyes, K Belhajjame, AJG Gray, C Goble, T Clark
Journal of Biomedical Semantics 4 (37), 2013
1092013
FAIRDOMHub: a repository and collaboration environment for sharing systems biology research
K Wolstencroft, O Krebs, JL Snoep, NJ Stanford, F Bacall, M Golebiewski, ...
Nucleic acids research 45 (D1), D404-D407, 2017
1042017
FAIR computational workflows
C Goble, S Cohen-Boulakia, S Soiland-Reyes, D Garijo, Y Gil, MR Crusoe, ...
Data Intelligence 2 (1-2), 108-121, 2020
1022020
Open Annotation data model
R Sanderson, P Ciccarese, H Van de Sompel, S Bradshaw, D Brickley, ...
W3C Community draft, 2013
88*2013
Sharing interoperable workflow provenance: A review of best practices and their practical application in CWLProv
FZ Khan, S Soiland-Reyes, RO Sinnott, A Lonie, C Goble, MR Crusoe
GigaScience 8 (11), giz095, 2019
622019
Methods Included: Standardizing Computational Reuse and Portability with the Common Workflow Language
MR Crusoe, S Abeln, A Iosup, P Amstutz, J Chilton, N Tijanić, H Ménager, ...
Communications of the ACM 65 (6), 54-63, 2022
58*2022
Performing statistical analyses on quantitative data in Taverna workflows: an example using R and maxdBrowse to identify differentially-expressed genes from microarray data
P Li, JI Castrillo, G Velarde, I Wassink, S Soiland-Reyes, S Owen, ...
BMC bioinformatics 9, 1-11, 2008
572008
Designing the W3C open annotation data model
R Sanderson, P Ciccarese, H Van De Sompel
Association for Computing Machinery, 2013
552013
I'll take that to go: Big data bags and minimal identifiers for exchange of large, complex datasets
K Chard, M D'Arcy, B Heavner, I Foster, C Kesselman, R Madduri, ...
2016 Ieee international conference on big data (big data), 319-328, 2016
502016
The role of metadata in reproducible computational research
J Leipzig, D Nüst, CT Hoyt, K Ram, J Greenberg
Patterns 2 (9), 100322, 2021
492021
FAIR principles for research software (FAIR4RS principles)
NPC Hong, DS Katz, M Barker, AL Lamprecht, C Martinez, ...
472022
Community-driven development for computational biology at Sprints, Hackathons and Codefests
S Möller, E Afgan, M Banck, RJP Bonnal, T Booth, J Chilton, PJA Cock, ...
BMC bioinformatics 15, 1-7, 2014
472014
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Artiklar 1–20