Joep Vanlier
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Data2Dynamics: a modeling environment tailored to parameter estimation in dynamical systems
A Raue, B Steiert, M Schelker, C Kreutz, T Maiwald, H Hass, J Vanlier, ...
Bioinformatics 31 (21), 3558-3560, 2015
1592015
A Bayesian approach to targeted experiment design
J Vanlier, CA Tiemann, PAJ Hilbers, NAW van Riel
Bioinformatics 28 (8), 1136-1142, 2012
1032012
Parameter uncertainty in biochemical models described by ordinary differential equations
J Vanlier, CA Tiemann, PAJ Hilbers, NAW van Riel
Mathematical biosciences 246 (2), 305-314, 2013
932013
An integrated strategy for prediction uncertainty analysis
J Vanlier, CA Tiemann, PAJ Hilbers, NAW van Riel
Bioinformatics 28 (8), 1130-1135, 2012
792012
Driving the Model to Its Limit: Profile Likelihood Based Model Reduction
T Maiwald, H Hass, B Steiert, J Vanlier, R Engesser, A Raue, F Kipkeew, ...
PLOS ONE 11 (9), e0162366, 2016
452016
Optimal experiment design for model selection in biochemical networks
J Vanlier, CA Tiemann, PAJ Hilbers, NAW van Riel
BMC systems biology 8 (1), 1, 2014
382014
Parameter trajectory analysis to identify treatment effects of pharmacological interventions
CA Tiemann, J Vanlier, MH Oosterveer, AK Groen, PA Hilbers, ...
PLoS Comput Biol 9 (8), e1003166, 2013
302013
Parameter adaptations during phenotype transitions in progressive diseases
C Tiemann, J Vanlier, P Hilbers, N van Riel
BMC systems biology 5 (1), 174, 2011
272011
BISEN: Biochemical simulation environment
J Vanlier, F Wu, F Qi, KC Vinnakota, Y Han, RK Dash, F Yang, DA Beard
Bioinformatics 25 (6), 836-837, 2009
202009
Model Based Targeting of IL-6-Induced Inflammatory Responses in Cultured Primary Hepatocytes to Improve Application of the JAK Inhibitor Ruxolitinib
S Sobotta, A Raue, X Huang, J Vanlier, A Jünger, S Bohl, U Albrecht, ...
Frontiers in physiology 8, 775, 2017
112017
Computational modeling of mitochondrial energy transduction
JPJ Schmitz, J Vanlier, NAW van Riel, JAL Jeneson
Critical Reviews™ in Biomedical Engineering 39 (5), 2011
92011
Applications of analysis of dynamic adaptations in parameter trajectories
NAW van Riel, CA Tiemann, J Vanlier, PAJ Hilbers
Interface focus 3 (2), 20120084, 2013
72013
Uncertainty analysis in systems biology
J Vanlier
Technische Universiteit Eindhoven, 2014
62014
Using predictive differences to design experiments for model selection
J Vanlier, CA Tiemann, J Timmer, PAJ Hilbers, NAW van Riel
2014
Optimal Experiment Design for Model Selection in Biochemical Networks (Supplement)
J Vanlier, CA Tiemann, PAJ Hilbers, NAW van Riel
2013
A novel modelling approach to analyze complex metabolic pathway dynamics; application to LXR activated lipoprotein metabolism
CA Tiemann, J Vanlier, MH Oosterveer, PAJ Hilbers, AK Groen, NAW Riel
2013
PS9-44. Unravelling the kinetics of insulin signalling in skeletal muscle cells
CC Oncu, J Vanlier, P Hilbers, N van Riel
Nederlands Tijdschrift voor Diabetologie 10 (3), 129-129, 2012
2012
Challenges and opportunities for modeling signal transduction pathways using immunohistochemistry data
C Çölmekçi Öncü, J Vanlier, PAJ Hilbers, NAW van Riel
2012
Challenges and opportunities for modeling signal transduction pathways using immunohistochemistry data
CCÇ Öncü, JJ Vanlier, PAJP Hilbers
2012
Targeted experiment design using the posterior predictive distribution
J Vanlier, CA Tiemann, PAJ Hilbers, NAW van Riel
2012
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Artiklar 1–20