Rute R da Fonseca
Title
Cited by
Cited by
Year
Whole-genome analyses resolve early branches in the tree of life of modern birds
ED Jarvis, S Mirarab, AJ Aberer, B Li, P Houde, C Li, SYW Ho, ...
Science 346 (6215), 1320-1331, 2014
12912014
Comparative genomics reveals insights into avian genome evolution and adaptation
G Zhang, C Li, Q Li, B Li, DM Larkin, C Lee, JF Storz, A Antunes, ...
Science 346 (6215), 1311-1320, 2014
6712014
Patterns of positive selection in six mammalian genomes
C Kosiol, T Vinař, RR da Fonseca, MJ Hubisz, CD Bustamante, R Nielsen, ...
PLoS Genet 4 (8), e1000144, 2008
5022008
The adaptive evolution of the mammalian mitochondrial genome
RR Da Fonseca, WE Johnson, SJ O'Brien, MJ Ramos, A Antunes
BMC genomics 9 (1), 119, 2008
2942008
Proteomic analysis of a pleistocene mammoth femur reveals more than one hundred ancient bone proteins
E Cappellini, LJ Jensen, D Szklarczyk, A Ginolhac, RAR da Fonseca, ...
Journal of proteome research 11 (2), 917-926, 2012
1662012
Ancient genomics
C Der Sarkissian, ME Allentoft, MC Ávila-Arcos, R Barnett, PF Campos, ...
Philosophical Transactions of the Royal Society B: Biological Sciences 370 …, 2015
1072015
Analysis of complete mitochondrial genomes from extinct and extant rhinoceroses reveals lack of phylogenetic resolution
E Willerslev, MTP Gilbert, J Binladen, SYW Ho, PF Campos, A Ratan, ...
BMC evolutionary biology 9 (1), 95, 2009
1072009
The origin and evolution of maize in the Southwestern United States
RR da Fonseca, BD Smith, N Wales, E Cappellini, P Skoglund, ...
Nature plants 1 (1), 1-5, 2015
1062015
Next-generation biology: sequencing and data analysis approaches for non-model organisms
RR da Fonseca, A Albrechtsen, GE Themudo, J Ramos-Madrigal, ...
Marine Genomics 30, 3-13, 2016
1042016
Cephalopods in neuroscience: regulations, research and the 3Rs
G Fiorito, A Affuso, DB Anderson, J Basil, L Bonnaud, G Botta, A Cole, ...
Invertebrate Neuroscience 14 (1), 13-36, 2014
1042014
Positive selection on the killer whale mitogenome
AD Foote, PA Morin, JW Durban, RL Pitman, P Wade, E Willerslev, ...
Biology letters 7 (1), 116-118, 2011
1032011
Molecular evolution and the role of oxidative stress in the expansion and functional diversification of cytosolic glutathione transferases
RR da Fonseca, WE Johnson, SJ O'Brien, V Vasconcelos, A Antunes
BMC evolutionary biology 10 (1), 281, 2010
782010
The elusive nature of adaptive mitochondrial DNA evolution of an arctic lineage prone to frequent introgression
J Melo-Ferreira, J Vilela, MM Fonseca, RR da Fonseca, P Boursot, ...
Genome biology and evolution 6 (4), 886-896, 2014
702014
Large-scale ruminant genome sequencing provides insights into their evolution and distinct traits
L Chen, Q Qiu, Y Jiang, K Wang, Z Lin, Z Li, F Bibi, Y Yang, J Wang, ...
Science 364 (6446), 2019
602019
Phylogenomic analyses data of the avian phylogenomics project
ED Jarvis, S Mirarab, AJ Aberer, B Li, P Houde, C Li, SYW Ho, ...
GigaScience 4 (1), s13742-014-0038-1, 2015
602015
Natural selection shaped the rise and fall of passenger pigeon genomic diversity
GGR Murray, AER Soares, BJ Novak, NK Schaefer, JA Cahill, AJ Baker, ...
Science 358 (6365), 951-954, 2017
582017
Cephalopod genomics: a plan of strategies and organization
CB Albertin, L Bonnaud, CT Brown, WJ Crookes-Goodson, ...
Standards in genomic sciences 7 (1), 175-188, 2012
562012
Molecular clocks indicate turnover and diversification of modern coleoid cephalopods during the Mesozoic Marine Revolution
AR Tanner, D Fuchs, IE Winkelmann, MTP Gilbert, MS Pankey, ...
Proceedings of the Royal Society B: Biological Sciences 284 (1850), 20162818, 2017
522017
Comparative analysis of complete mitochondrial genomes suggests that relaxed purifying selection is driving high nonsynonymous evolutionary rate of the NADH2 gene in whitefish …
MW Jacobsen, RR Da Fonseca, L Bernatchez, MM Hansen
Molecular Phylogenetics and Evolution 95, 161-170, 2016
422016
Theoretical quantitative structure–activity relationships of flavone ligands interacting with cytochrome P450 1A1 and 1A2 isozymes
F Iori, R Da Fonseca, MJ Ramos, MC Menziani
Bioorganic & medicinal chemistry 13 (14), 4366-4374, 2005
402005
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Articles 1–20